Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00695 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGACAGCTCCTCCAGAATTGAAACCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAGCAAGAAGCAAGCAATTGAAGCTGTAAATTCTAGACCTGTTCCTGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACTCAAGTTTTCAGTCAGTCCCTGGACACTTCACTGATCGTCTTTTTGGCTCAGAGCCAATACGAACTGTTAACTTGGTTGATAGAGGCATCTCTGTGGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTACAAACAACCCATCTGTTGGCTTGTCCATGTCTCAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGGGGAATTAGAAAAGTTAAAGTCAATCAAGTGAGGGATCCTGACGTTGGCATGCCTGCTTCTTTGGGGCATGCCTATACTAGGGGTGATAATTGTACAATTTCGATGGGTACAGGATTTAATAAAAACCATGAGAACACCATATCATTGGGCCAAACTTATAATAGTAGAGATGAGAATGCCATTTCGGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGGAGTTTTATTACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCTTATCGATGAATCAGCCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGTCAATCTTATGAGAAGGCTGAAGGAAATATCATCTCTTTTGCCTCCTACAATAAAGGGCAAGAAAATTTTATATCAATGGGGCCAGCCTATAGTAAGGCGGGTGATACTTTCATTTCAATGGCTTCATCTTTTAATAAGGGGAATGATGACAACTTATCCATGGCTCCCACCTATGACAAGGTGAACTCTGACATTGTACATGTTGGTCCTAAATTTGACAAAGCAGATTCTGGTGCTGTGTCAATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGACGAGAATGGGACAGATAATCCCTCTGGTGGGATCATTAGCAGTTACGACTTGTTAATGGCTAATCAGGCTTCTGCCCAGGCATCAGAAGTATCAACCCTGAGAGACTCAGTTGATCCCAATGTGGAAGTAAACATTAACGGTGCCATAAAGGTTGATGGAAAAATTGACACAAATTCCAAAAGTAAAGAGCCAAGGATGAGTAAGAAGGTTCCACCAAATAGCTTCCCTTCAAATGTCAAAAGCTTGCTCTCCACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATTAAAGGGACTGGATACTTGTGCAGTTGTGAGAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAATTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAATAACCATATTTACTTTGAGAATGGGAAAACTATCTATGCTGTTGTTCAAGAGCTGAAGAACACCCCTCAGGAGATGCTATTTGATGCAATCCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTCCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTCGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGA 1749 41.4 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIETKRGHQWFMDGSAPELFSSKKQAIEAVNSRPVPGVPHMNVSPWENSSFQSVPGHFTDRLFGSEPIRTVNLVDRGISVGNANMDMGRKEFENHFTNNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDPDVGMPASLGHAYTRGDNCTISMGTGFNKNHENTISLGQTYNSRDENAISVGPAYHKTDDNFISMGHAFSKGDGSFITIGHNYSKGDNSILSMNQPFDKGDDSFISMGQSYEKAEGNIISFASYNKGQENFISMGPAYSKAGDTFISMASSFNKGNDDNLSMAPTYDKVNSDIVHVGPKFDKADSGAVSMAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASEVSTLRDSVDPNVEVNINGAIKVDGKIDTNSKSKEPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCENCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVIMPS* 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4636359 4641587 + CsaV3_5G006950.1 Csa05g00695 529082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00695 582 MobiDBLite consensus disorder prediction 423 444 - -
Csa05g00695 582 Pfam Tify domain binding domain 475 530 IPR032308 -
Csa05g00695 582 PANTHER N-LYSINE METHYLTRANSFERASE 1 582 - -
Csa05g00695 582 PANTHER AUTOIMMUNE REGULATOR 1 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00695 Csa-Chr5:4636359 Csa03g03331 Csa-Chr3:30240795 1.81E-16 dispersed
Csa06g01725 Csa-Chr6:15180723 Csa05g00695 Csa-Chr5:4636359 9.10E-39 transposed
Csa03g03200 Csa-Chr3:29524995 Csa05g00695 Csa-Chr5:4636359 3.81E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00695 - - csv:101206313 1193.72