Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00696 ATGAGGGTGGGGTTATTCGAACTTTACGCCCATAATACTTTTTTCTCATCATTGTTTCATAACACAATTTCGGGTAAAGGGAGAAAGCTAACCCTCCACAAATGGTTGCATATAGGAATACATAATCTAAATTATAAGAATTTCAATGAAACAATACGAACATTGATATATGGCAGGCTCGAGAGAGTGAATATTTGGAAAAGAGGAAGCCAAGCAAAAATAGTAGGAACCATAGTAACAATAGGAGGAGCCATGATTATGACATTCATAAGAGGACCCATGTTGAATCTGCCATGGACAAAACCCAACCACCCCTCTTCTTCTTCTTCTTCATCTTCTTCAATAAATCACCACAACCAAATCAAGGGCTCCCTCATGATAACTATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCAATTACATTGAAATTGTACCCAGCCGAGCTATCCCTTACAGCATTGATATGTTTAGTGGCAACCGTTGGAGGCTGTTTGGTGGCTTTGGTCATGGAGAGAGGGAACCCTTCTGCTTGGGCTTTGCACTTTGATAGCCAGCTTCTATCTGTGGTTTATGCTGGTGTAATTTGTTCAGGGGTAACATACTACATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTATCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTATCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGACCATAATCACTGGGTTGTACCTGGTTTTGTGGGGCAAAAGAAAAGATAAGCTTTTAGTTAAATCAGACTCTGATGGTAAGCAACAAATGACTGAAACAGATGAGGCTTCGAAGAGGACGGTTCAACCGAGTCAAGAATTCATCTCGCTTGATGTTACCAGAGAGACAAAATGA 927 40.56 MRVGLFELYAHNTFFSSLFHNTISGKGRKLTLHKWLHIGIHNLNYKNFNETIRTLIYGRLERVNIWKRGSQAKIVGTIVTIGGAMIMTFIRGPMLNLPWTKPNHPSSSSSSSSSINHHNQIKGSLMITIGCICQSAFIILQAITLKLYPAELSLTALICLVATVGGCLVALVMERGNPSAWALHFDSQLLSVVYAGVICSGVTYYIQGMVMQIKGPVFVTAFNPLSMIFVAIMSSFILSEIMLLGRIVGAVTIITGLYLVLWGKRKDKLLVKSDSDGKQQMTETDEASKRTVQPSQEFISLDVTRETK* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4642890 4644342 - CsaV3_5G006960.1 Csa05g00696 529083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00696 308 MobiDBLite consensus disorder prediction 273 292 - -
Csa05g00696 308 PANTHER WAT1-RELATED PROTEIN 59 276 IPR030184 GO:0016021|GO:0022857
Csa05g00696 308 Pfam EamA-like transporter family 122 261 IPR000620 GO:0016020|GO:0016021
Csa05g00696 308 PANTHER WAT1-RELATED PROTEIN 59 276 - -
Csa05g00696 308 SUPERFAMILY Multidrug resistance efflux transporter EmrE 171 266 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00696 Csa-Chr5:4642890 Csa05g01817 Csa-Chr5:21509536 1.80E-81 dispersed
Csa05g00696 Csa-Chr5:4642890 Csa05g00698 Csa-Chr5:4712690 6.70E-113 proximal
Csa04g01463 Csa-Chr4:14463477 Csa05g00696 Csa-Chr5:4642890 1.38E-85 wgd
Csa05g00696 Csa-Chr5:4642890 Csa05g01814 Csa-Chr5:21408081 6.28E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00696 - - csv:101206072 480.715