Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00698 ATGGAGTCTTTTATAAGGTTTTTGCGTTCTGCCAAGCCGTATTTCGGAGTTATTTTCGTGCAATTTGGTTACGCTGGAATGGCGATTCTTACAAAATCAGCTTTGGATAAAGGAATGAGCCAACATGTTTTTGTGGCTTATCGTCAAGTTGCTGCTACTCTCGTCATTGCTCCTTTCGCCATTATCTTTGAGAGGAAGGCAAGGACAAAGATGACCTTTTCATTGTTGTTCAAAATTTTGCTTCTGGGTTTCTTAGAGCCAGTGATTGATCAAAACTTGTACTATACGGGTATGAAGTACACAACAGCAACCTTTGCTGCTGCGATGTGCAATGTTTTGCCAGCTTTTGTTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAAGATTATGAAAAGGGGAAGCCAAGCAAAAATCTTAGGAACAATAGTAACAGTTGGAGGAGCCATGATTATGACATTCATAAGAGGCCCAATGTTGAATCTACCATGGACAAAGTTACCAAATCAGGTCTCAGCTTCTTCTTCTTTATCAGCTGCTTCTCCAGATCACCAAAATCAAATCGTTGGCTTCCTCATGATTACAACTGGCTGCGTTTGTTGGGCAGCTTTCATCACTCTTCAGGCGATTACATTGAAAGAGTACCCCGCCGATCTGTCGCTTACGACATTGATATGCTTGGTGGGCACCATTGGAGGTTTTGGGGTGGCTTTGGTCATTGAGAGAGGGAACGTTTCTGCTTGGGCTTTGCACTTTGATAGCCAGCTTCTAGCTGTGGTTTATTCTGGAGTAATATGTTCAGGGGTAACGTATTATATTCAAGGAGTGGTAATGCAAACAAAAGGGCCAGTTTTTTTCGCTTCATTCAATCCTCTAGCCATGATTCTTGTTGCGATCATGAGCTTCTTCATCTTGTCTGAGATTATGTTTTTGGGAAGGATGATTGGAGTAGTGATCATAATATGTGGCCTGTACATGGTTTTATGGGGGAAAAGCCAAGATGAACCTCCAGTTTTGAACTCTGAATGTGATAACATGACACCTTGTGAGCAACAAATGAAGACCACAACAACAGTTCAATCGAGTCAAGATTTCCTCGCGCTCAATGTTGCAAAAGAGGAGAAAAATTGA 1134 42.06 MESFIRFLRSAKPYFGVIFVQFGYAGMAILTKSALDKGMSQHVFVAYRQVAATLVIAPFAIIFERKARTKMTFSLLFKILLLGFLEPVIDQNLYYTGMKYTTATFAAAMCNVLPAFVFLMAWACRLEKVKIMKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKLPNQVSASSSLSAASPDHQNQIVGFLMITTGCVCWAAFITLQAITLKEYPADLSLTTLICLVGTIGGFGVALVIERGNVSAWALHFDSQLLAVVYSGVICSGVTYYIQGVVMQTKGPVFFASFNPLAMILVAIMSFFILSEIMFLGRMIGVVIIICGLYMVLWGKSQDEPPVLNSECDNMTPCEQQMKTTTTVQSSQDFLALNVAKEEKN* 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4712690 4717265 - CsaV3_5G007970.1 Csa05g00698 529085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00698 377 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Csa05g00698 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Csa05g00698 377 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Csa05g00698 377 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020|GO:0016021
Csa05g00698 377 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Csa05g00698 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01463 Csa-Chr4:14463477 Csa05g00698 Csa-Chr5:4712690 1.01E-137 dispersed
Csa05g00698 Csa-Chr5:4712690 Csa05g01814 Csa-Chr5:21408081 1.49E-137 dispersed
Csa05g00696 Csa-Chr5:4642890 Csa05g00698 Csa-Chr5:4712690 6.70E-113 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00698 - - csv:101222086 735.717