Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00754 ATGGGAAAACCATCTGGAGGAGGTTTCTTGGCTGCGTCCCAACTGCACACCAGCATGCTTCAACAAGTTCTTACCTCAAGTGATGCATCAAAATCTCTAGTGTATAGCTATCACCGGAGCTTCAGCGGCTTTGCAGCCAGGCTCAACGATGATGAGGCTCGAAAACTTGCTGAGATGGATGAAGTTGTGTCTGTGTTTCCAAGTGAAAAACACCAACTTCACACTACAAGATCATGGGATTTCATGGGCTTCTTCCAACAAGCTTCAAGAACAACCTTGGAGAGTGATTTGATCATTGGAATGTTGGATACCGGAATTTGGCCGGAATCTAAAAGCTTTTCCGATGAAGGCTTTGGCCCGCCGCCGTCTAAATGGAAAGGCGAATGCAAACCCTCTTTAAATTTCACTTGCAACAATAAAATAATTGGAGCTCGATTCTTCCGGAGCCAGCCTCCCTCTCCCGGCGGAGCAGATATTCTTTCTCCAAGAGACACAATAGGCCATGGAACCCACACCTCTTCCACTGCCGGCGGCAATTTTGTTTCCGACGCCAACCTCTTCGGCCTTGCCGCCGGCACCTCTAGGGGTGGCGTTCCCTCCGCCCGCATTGCTGTCTACAAGATTTGCTGGCCCGATGGTTGCTTTGGTGCCGACATCCTCGCAGCTTTCGACCATGCAATCGCTGATGGTGTCGATATCATCTCCATTTCCGTCGGAAGTATTTTCCCCAGGAATTACTTCAACGATTCAATTGCTATTGGAGCTTTTCACGCAATGAAGAATGGGATTCTGACTTCAAATTCCGGTGGCAATTCTGGCCCTAGCATTGGTAGTATCTCTAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACTATCGATAGGAAGTTTGTGACTAAAGTGACTTTGGGTAATGGAGAATCCTTTCATGGGATCTCTCTAAACACATTTGATGCTGGAGATAAGTTGTTTCCACTTATTCATGCTGGTGAGGCTCCTAATACAACTGCAGGTTTCAATGGATCAATATCAAGGTTATGCTTCCCTGGTTCTTTGGACATGAACAAAGTTCAGGGGAAGATTGTTTTATGCGATTTGATCAGTGACGGAGAAGCAGCCCTGATTAGTGGTGCGGTTGGTACAATAATGCAAGGTTCTACCCTCCCAGAAGTTGCCTTTCTTTTCCCTCTACCTGTTTCCTTGATAAACTTCAACGCTGGAAAGAATATTTTCCAGTACCTGAGATCAAACAGCAACCCAGAAGCTATCATAGAAAAGAGTACTACCATTGAGGATCTGTCTGCTCCATCTGTAATTTCCTTCTCATCAAGGGGTCCTAACACAGTTACACTGGACATTCTCAAGCCTGATTTGGCAGCATCAGGAGTGGATATATTAGCATCTTGGTCTGAAGGCACACCAATCACAGGTATAGTAGGGGATAAACGAATAGCTCCATTTAACATAATATCTGGCACATCCATGGCTTGCCCACATGCAACAGGAGCGGCTGCCTATGTCAAATCCTTCCACCCAACTTGGTCTCCTGCTGCTATTAAATCAGCACTTATGACAAGTGCTTTTCCCATGAGTCCAAAGTTGAACACAGACGCTGAATTCGCATATGGAGCAGGTCACTTAAATCCATCAAATGCCATTAACCCTGGTTTAGTCTATGATGCTGAAGAGCTTGACTACGTAAAGTTCTTATGTGGGCAAGGATATAGTACAGAAAAACTTCGTCTTGTTTCGGGTGATCAAAACAACTGTTCGGATGTTACAAAGACAGCTGCATCAGATCTAAACTATCCATCTTTTGGCCTAGTAATAATTTCTCCAAGTCAAAGATTGACTACTCGTGTCTACCACAGGACCGTCACAAATGTCGGGCTGCCAGCAGTTATTAAAGCTCCGCCAGGGCTCAAAGTTACAGTACGCCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATATCCTTCACTGTGACTGTGAGGGCTAAAGCAGATGTTGGTGGAAAGGTAATCTCTGGTAGCTTAACCTGGGATGATGGAGTGCATCTGAGGAAGCAGGTTTATGTTGTGTACATGGGAAAACCATCTGGAGGAGGTTTCTTGGCTGCGTCCCAACTGCACACCAGCATGCTTCAACAAGTTCTTACCTCAAGTGATGCATCAAAATCGTCTCTAGTGTATAGCTACCACCGGAGCTTCAGCGGCTTTGCAGCGAGGCTCAACGAAGACGAGGCTCGAAAACTCGCGGTGATGGATGGAGTTGTTTCTGTGTTTCCAAGTGAAAAAAAACAACTTCACACAACAAGATCATGGGATTTCATGGGTTTCTTCCAAGATGCTCCAACAACAAGATTGGAGAGTGATATAATCATCGGAATGTTGGATACCGGAATTTGGCCGGAATCTCAAAGCTTTTCCGATGAAGGCTTTGGCCCGCCACCATCTAAATGGAAAGGGGAATGCAAACCGACTCTTAATTTCACATGCAACAATAAAATAATTGGAGCTCGATTCTTTCGGAGCGAGCCGTTCGTCGGAGGCGATCTTCCTTCTCCAAGAGATGTAGAAGGCCATGGAACTCACACCTCATCCACCGCCGGCGGTAATTTTGTCTCCAACGCCAACCTCTTCGGCCTCGCCGCCGGCACCTCTCGAGGCGGTGTTCCCTCCGCCCGCATTGCTGTCTACAAGATTTGCTGGTCCGATGGTTGCCCCGACGCCGACATCCTCGCAGCTTTTGACCATGCAATTGCTGATGGTGTCGACATCATCTCCCTTTCTGTCGGAGGTTTTGGCGCCAGCGATTACTTAGACGATCCCATTGCTATTGGGGCTTTTCATGCAATGAAGAATGGGATTCTGACGTCAAATTCCGGTGGCAATGATGGCCCTAACCTTGGTAGTATCTCTAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACAATCGATAGGAAGTTTGTGACTAACGTGGCGTTGGGTAATGGAGAATCCATTCAGGGGATCTCTGTGAACACCTTTGATCTTGGAGATAAATTGTTTCCACTTATTCATGCTGGTGATGCTCCTAATACAACTGCGGGTTTTAATGGATCAACATCAAGGTTATGCTTCCCAGGTTCTTTGGACGAGGATAAAGTTCAGGGAAAGATTGTTATATGCGATTTGATCAGTGATGGAGAAGTAACCCAGAGTAGTGGTGCGGTTGGTACAATAATGCAAAATCCTAACTTCCAAGACGTTGCCTTTCTTTTCCCCCAACCTGTTTCCTTAATAAGTTTCAACACTGGAGAAAAACTTTTCCAGTACCTGAGATCAAACAGCAACCCAGAAGCTGCCATAGAAAAGAGTACTACCATTGAGGATCTGTCTGCTCCAGCTGTAGTTTCCTTCTCATCAAGGGGTCCTAACTTAATTACACTGGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATATTAGCATCTTGGTCTGAAGGCACATCAATCACAGGTTTAGTAGGGGATAAACGAATAGCTCCATTTAACATAATATCTGGCACATCCATGGCTTGCCCACATGCAACTGGAGCGGCTGCCTATGTCAAATCCTTCCACCCAACTTGGTCTCCTGCTGCTATTAAGTCAGCACTTATGACAAGTGCTTTTCCCATGAGTCCAAAGTTGAACACGGATGCTGAGTTAGGATATGGAGCAGGTCACTTAAATCCATCAAATGCCATTAACCCTGGTTTAGTCTATGATGCTGAAGAGCTCGACTACATAAAGTTCTTATGTGGGCAAGGATATAGTACAAAAGATCTTCGTCTTGTTTCGGGTGACCATAGCAACTGTTCGGATGTTACAAAAACAGCTGCATCAGATCTAAACTATCCATCTTTTGGTCTAGTAATCAATTCTACAAGTCAAAGATTGATTAGTCGTGTCTACCACAGGACCGTCACAAATGTCGGGCTGCCAGTCTCAACTTACAAGGCAGTTATTAAAGCTCCGCCCGGACTCAAAGTTACCGTACGTCCTGCTACTCTTTCTTTCCGTTCACTTGGACAAAAGATATCCTTCACTGTGACCGTGAGGGCTAAAGCAAATGTTGTTGGAAAGGTAGTCTCTGGTAGCTTAACTTGGGATGATGGAGTGCATCTGGTGAGGAGCCCCATCGTTTCATTTGTTCTTCCATAA 4206 45.82 MGKPSGGGFLAASQLHTSMLQQVLTSSDASKSLVYSYHRSFSGFAARLNDDEARKLAEMDEVVSVFPSEKHQLHTTRSWDFMGFFQQASRTTLESDLIIGMLDTGIWPESKSFSDEGFGPPPSKWKGECKPSLNFTCNNKIIGARFFRSQPPSPGGADILSPRDTIGHGTHTSSTAGGNFVSDANLFGLAAGTSRGGVPSARIAVYKICWPDGCFGADILAAFDHAIADGVDIISISVGSIFPRNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSIGSISNVSPWSLSVAASTIDRKFVTKVTLGNGESFHGISLNTFDAGDKLFPLIHAGEAPNTTAGFNGSISRLCFPGSLDMNKVQGKIVLCDLISDGEAALISGAVGTIMQGSTLPEVAFLFPLPVSLINFNAGKNIFQYLRSNSNPEAIIEKSTTIEDLSAPSVISFSSRGPNTVTLDILKPDLAASGVDILASWSEGTPITGIVGDKRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTSAFPMSPKLNTDAEFAYGAGHLNPSNAINPGLVYDAEELDYVKFLCGQGYSTEKLRLVSGDQNNCSDVTKTAASDLNYPSFGLVIISPSQRLTTRVYHRTVTNVGLPAVIKAPPGLKVTVRPATLSFRSLGQKISFTVTVRAKADVGGKVISGSLTWDDGVHLRKQVYVVYMGKPSGGGFLAASQLHTSMLQQVLTSSDASKSSLVYSYHRSFSGFAARLNEDEARKLAVMDGVVSVFPSEKKQLHTTRSWDFMGFFQDAPTTRLESDIIIGMLDTGIWPESQSFSDEGFGPPPSKWKGECKPTLNFTCNNKIIGARFFRSEPFVGGDLPSPRDVEGHGTHTSSTAGGNFVSNANLFGLAAGTSRGGVPSARIAVYKICWSDGCPDADILAAFDHAIADGVDIISLSVGGFGASDYLDDPIAIGAFHAMKNGILTSNSGGNDGPNLGSISNVSPWSLSVAASTIDRKFVTNVALGNGESIQGISVNTFDLGDKLFPLIHAGDAPNTTAGFNGSTSRLCFPGSLDEDKVQGKIVICDLISDGEVTQSSGAVGTIMQNPNFQDVAFLFPQPVSLISFNTGEKLFQYLRSNSNPEAAIEKSTTIEDLSAPAVVSFSSRGPNLITLDILKPDLAAPGVDILASWSEGTSITGLVGDKRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTSAFPMSPKLNTDAELGYGAGHLNPSNAINPGLVYDAEELDYIKFLCGQGYSTKDLRLVSGDHSNCSDVTKTAASDLNYPSFGLVINSTSQRLISRVYHRTVTNVGLPVSTYKAVIKAPPGLKVTVRPATLSFRSLGQKISFTVTVRAKANVVGKVVSGSLTWDDGVHLVRSPIVSFVLP* 1402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5213871 5231188 + CsaV3_5G008530.1 Csa05g00754 529141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00754 1401 Gene3D - 295 432 - -
Csa05g00754 1401 Gene3D - 991 1128 - -
Csa05g00754 1401 Pfam Fibronectin type-III domain 1297 1396 IPR041469 -
Csa05g00754 1401 Pfam Fibronectin type-III domain 601 688 IPR041469 -
Csa05g00754 1401 PANTHER PUTATIVE-RELATED 692 1398 - -
Csa05g00754 1401 PANTHER PUTATIVE-RELATED 1 689 - -
Csa05g00754 1401 Pfam Peptidase inhibitor I9 693 772 IPR010259 -
Csa05g00754 1401 Pfam Peptidase inhibitor I9 12 74 IPR010259 -
Csa05g00754 1401 CDD PA_subtilisin_like 1000 1121 - -
Csa05g00754 1401 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 692 1398 IPR045051 -
Csa05g00754 1401 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 689 IPR045051 -
Csa05g00754 1401 Pfam Subtilase family 793 1229 IPR000209 GO:0006508|GO:0008236
Csa05g00754 1401 Gene3D Peptidase S8/S53 domain 96 567 IPR036852 GO:0004252|GO:0006508
Csa05g00754 1401 Gene3D Peptidase S8/S53 domain 794 1263 IPR036852 GO:0004252|GO:0006508
Csa05g00754 1401 CDD PA_subtilisin_like 302 425 - -
Csa05g00754 1401 Pfam Subtilase family 95 546 IPR000209 GO:0006508|GO:0008236
Csa05g00754 1401 ProSitePatterns Serine proteases, subtilase family, serine active site. 1189 1199 IPR023828 -
Csa05g00754 1401 ProSiteProfiles Serine proteases, subtilase domain profile. 78 554 - -
Csa05g00754 1401 Gene3D - 1267 1398 - -
Csa05g00754 1401 Gene3D - 571 697 - -
Csa05g00754 1401 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Csa05g00754 1401 CDD Peptidases_S8_3 769 1224 IPR034197 -
Csa05g00754 1401 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Csa05g00754 1401 ProSiteProfiles Serine proteases, subtilase domain profile. 776 1250 - -
Csa05g00754 1401 MobiDBLite consensus disorder prediction 149 174 - -
Csa05g00754 1401 CDD Peptidases_S8_3 71 528 IPR034197 -
Csa05g00754 1401 SUPERFAMILY Subtilisin-like 78 555 IPR036852 GO:0004252|GO:0006508
Csa05g00754 1401 PRINTS Subtilisin serine protease family (S8) signature 1188 1204 IPR015500 -
Csa05g00754 1401 PRINTS Subtilisin serine protease family (S8) signature 792 811 IPR015500 -
Csa05g00754 1401 PRINTS Subtilisin serine protease family (S8) signature 860 873 IPR015500 -
Csa05g00754 1401 SUPERFAMILY Subtilisin-like 771 1254 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01728 Csa-Chr1:13903554 Csa05g00754 Csa-Chr5:5213871 4.88E-06 dispersed
Csa03g00392 Csa-Chr3:3280005 Csa05g00754 Csa-Chr5:5213871 3.36E-157 dispersed
Csa05g00754 Csa-Chr5:5213871 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g02709 Csa-Chr5:27883660 Csa05g00754 Csa-Chr5:5213871 0 dispersed
Csa05g00753 Csa-Chr5:5202603 Csa05g00754 Csa-Chr5:5213871 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00754 - - gra:105775705 1574.3