Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00800 ATGGGTTCCGCTTATCGTGATCGGACGTCGGAATTTCGTTCACTATTGGAGACGCTGAAGAAGATTGGCGGAGCCACATCCGCCATGAATCAAGCTCAAAATGAACCATCGGCGTCTACGCCCTCCGGATCCCCGGCCTTTGCACGATCAGAATTCAGCAAAAAGGCCTCCCGCATCGGATTAGGAATCCAAGATACCTCTCAGAAGATCGTGAGGCTCGCTCAGTTGGCGAAAAGATCATCAATGTTTGATGACCCAATCAGGGAAATACAGGAAATGACTGCTTTGATTAAGAATGATATTACATCCTTGAACGTAGCTATCACAGAGTTGCAAACCATCCATAACATGGAGACAACAGAGGGGAATTCTTCAGAGGATAGAGTGGTTCATTCAACAGCTGTCTGTGATGATCTGAAGAGCAGACTTATGGGTGCTACAAAACAGCTACAAGATGTGCTAACCACAAGAACAGAGAATATCAAGGCCAATGAGAGCCGGAGGCAAATATTTTCTGCAAATGCATCTAGGGAAAGTCCTTTTCAAAATCAAGCCAAAGCTGTAACACAACCTCCACCTTGGTCAAGCAATACATCTGGAAGTGCCCAATCATCACTGTTGTCATCAAATGGAGCTCAAGTTGGGGGTCAATTGAGTCAGACGAAGGTTAGCTGTGGAGAACATGAACACCCCATCACAGCAAATGGAGATGTCGATGTTACAGCAGGTGGTTCCTAG 738 46.07 MGSAYRDRTSEFRSLLETLKKIGGATSAMNQAQNEPSASTPSGSPAFARSEFSKKASRIGLGIQDTSQKIVRLAQLAKRSSMFDDPIREIQEMTALIKNDITSLNVAITELQTIHNMETTEGNSSEDRVVHSTAVCDDLKSRLMGATKQLQDVLTTRTENIKANESRRQIFSANASRESPFQNQAKAVTQPPPWSSNTSGSAQSSLLSSNGAQVGGQLSQTKVSCGEHEHPITANGDVDVTAGGS* 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5609251 5612538 + CsaV3_5G008990.1 Csa05g00800 529187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00800 245 MobiDBLite consensus disorder prediction 26 47 - -
Csa05g00800 245 MobiDBLite consensus disorder prediction 26 48 - -
Csa05g00800 245 MobiDBLite consensus disorder prediction 173 245 - -
Csa05g00800 245 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Csa05g00800 245 Gene3D - 48 229 - -
Csa05g00800 245 PANTHER SYNTAXIN-31 4 219 - -
Csa05g00800 245 PANTHER SYNTAXIN 4 219 IPR045242 -
Csa05g00800 245 SUPERFAMILY t-snare proteins 49 214 IPR010989 GO:0016020|GO:0016192
Csa05g00800 245 MobiDBLite consensus disorder prediction 173 226 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00800 K08490 - csv:101213786 405.216