Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00809 ATGGCTTTCTTCTTCTCCTTCTTCTTCTTCTTTTTCCTTTCCTTTCTTTTGGCTTCTTCTCTCTTTCTCCTACTCCGTCCGGCCAGATTCCGCCGTATGCGGCTGCCGCCGGGGACTCTTGGCCTTCCCTTGATCGGAGAGACCCTTCAAATCATCTCCGCCTACAAGACCGAGAACCCTGAACCCTTCATCGACGAACGGGTGCGGAAATATGGGCCGGTTTTTACGACGCATTTGTTTGGTGAACCGACGGTTTTCTCAGCCGATTGGGAAACGAACCGGTTTATTCTTCAGAATGAAGAGAAGCTTTTTGAGTGTAGTTACCCCGGTTCGATTTCTAACCTTCTTGGGAAGCATTCTTTGTTGCTTATGAAAGGAAGTTTACATAAGAGAATGCATTCTTTGACTATGAGTTTTGGAAATTCTTCGATTCTTAGAGATCATCTTTTGGCCGATGTGGACCGGTTGATCCGGCTCAATTTGGACTCTTGGACCGGCCGGATCGTCCTCATGGAAGAAGCTAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGCTGTGAATGGACTCAAAGTCTCATGAAACAATATCTTCTCGTCATTGAAGGATTTTTTACCGTCCCTCTCCCTCTTTTTTCATCCACTTACCGTCGAGCCATCCAGGCCCGGAGGAAGGTGGCGGAGCAATTGGGGACGGTGGTGCGGGAACGGAGGAAGGAGAGTGAGGAAGGGGTGAGGAAGAAGGACATGCTCGGTGCGCTGCTCGAAGGAGAAGACGCCCTCTCCGACGAGCAAATAGTGGATTTTTTACTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACTACCATGACGCTGGCCGTCAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCACCAACAAATCAAAGCAAGAATGAAGGAATCAAACCAACACCTCCAATGGAATGATTACAAGTCCATGCCCTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCAAACATAATCAGTGGGGTATTTAGGAGAGTAATGACGGATGTAAACATTAAAGGTTATACGATTCCGAAAGGATGGAAGGTTTTCGCATCATTTCGTGCAGTACATATGGACCATGAGCATTTCAAAGATGCACGTTCTTTTAACCCATGGAGATGGCAAAAGCAGAATAGCTCGGGCTCAATGACATTAAATGCGTTTACACCCTTTGGTGGAGGTTCGAGATTATGTCCAGGTTACGAGCTGGCTAGAGTAGAACTCTCTGTTTTTCTTCATCATCTTGTCACCCAATTCAGTTGGGTTCCAGCAGAAAACGATAAGTTAGTATTTTTCCCAACGACAAGAACACAGAAGCGCTATCCTATATATGTGACGCGTAAGAACGAAACTACACAAAGTAAAGACAGCCATCCAGACACATGA 1461 46.06 MAFFFSFFFFFFLSFLLASSLFLLLRPARFRRMRLPPGTLGLPLIGETLQIISAYKTENPEPFIDERVRKYGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFGNSSILRDHLLADVDRLIRLNLDSWTGRIVLMEEAKKITFELAVKQLMSFDRCEWTQSLMKQYLLVIEGFFTVPLPLFSSTYRRAIQARRKVAEQLGTVVRERRKESEEGVRKKDMLGALLEGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHQQIKARMKESNQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRVMTDVNIKGYTIPKGWKVFASFRAVHMDHEHFKDARSFNPWRWQKQNSSGSMTLNAFTPFGGGSRLCPGYELARVELSVFLHHLVTQFSWVPAENDKLVFFPTTRTQKRYPIYVTRKNETTQSKDSHPDT* 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5807093 5813372 + CsaV3_5G010070.1 Csa05g00809 529196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00809 486 Gene3D Cytochrome P450 25 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Csa05g00809 486 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 SUPERFAMILY Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PANTHER CYTOCHROME P450 90A1 14 472 - -
Csa05g00809 486 Pfam Cytochrome P450 196 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00809 486 PANTHER CYTOCHROME P450 26 14 472 - -
Csa05g00809 486 Coils Coil 304 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02406 Csa-Chr4:24307454 Csa05g00809 Csa-Chr5:5807093 5.50E-91 dispersed
Csa05g00809 Csa-Chr5:5807093 Csa07g02396 Csa-Chr7:22043310 4.20E-121 dispersed
Csa06g00760 Csa-Chr6:6137200 Csa05g00809 Csa-Chr5:5807093 1.68E-78 dispersed
Csa07g00762 Csa-Chr7:5351643 Csa05g00809 Csa-Chr5:5807093 7.48E-86 dispersed
Csa05g00809 Csa-Chr5:5807093 Csa03g04086 Csa-Chr3:35819170 5.36E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00809 K09588 - csv:101216594 906.36