Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00917 ATGGCCATAACCTTCCTTGCTATCATTTTATTCATATATTCAATTATTTATGCTATAAAATTTTCTCAATATTATCTCAAAGGAACTCCCTCAATTCGCCGGCTTCCACCTGGCCCAAAGCCATGGCCTCTCATTGGTTGCCTTCCAGCAATGTTGAGCAACAAAAACTTGCCAGCATACCAATGGATCCATGAAGTTATGAAGCAATTCAACACTGAAATTGCATGTATTCGTCTTGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCTCTCTTGAATTTCTAAACACACACGATTCTGTGTTCGGTTCACGATCTATCTCCATGACTGCTGAGATAGTGAGCAATGGATATCTAAGTACAGTTCTTTCACCCATGGGAGAGCAGTGGAAGAAGATGAGAAAAATACTCGCTTCTCAAGTACTCAATTCTTCAACCCTCCATCGAATGCTTGGGCAAAGAACAGATGAAGCCGATATTCTCCTGCGTTACATTTTCGGCCTCACTAAAAACGGTGAAGCGATCAACATAAGAAGCATTGTACGACATTATTGTGGTACCGTTATTAGAAGAATGATTTTTAGTAGAAGATACTACGGAAAAGGTAGGGAAGATGGAGGGCCATCTTTAGAAGAAGAAGAACACAATCAAGCATTGTTGTCCATTCTTAGGCATGTTAATGCATTTTCTATATCTGAGTTTATACCTCTGTTGAAGACATTTGATCTAGATGGACATGGAAAGATAGTAAAAAGGGCTCTGAAAGTTATAAGAAATCATGATGAACCCATTATAGAAGAAAGAGTGCAAGAGTGGGGAGATGGAAAGAAAAAGAAGGTGGAGGACATTCTTGATATTCTTATCTCACTCAAAAATGAGAATGGCAAATCCTTGTTGTCCATCGAAGAGATTAAGGCTCAAGTCACGGATTTGCAACTTGCAAGCATAGATAATCCTTCAAATGCAGTGGAATGGGCACTAGCAGAATTACTTAATCAACCAAAGATTATCCAACAAGCCCTTGAAGAGTTAGATAAAGTAATTGGAAGAGATAGACTAGTACAAGAATCTGATATACCTAACCTCAAGTACCTCACAGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCCAACTCTGACGTTTTTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGTATTACTAAGTCGTCTGGGTCTCGGTCGAAACCCTAGAATATGGGAGGATCCAATGAAGTTTGATCCAGAGCGTCATCTAAAAGATGGGACAGTTAAATTCGGAATTTCAGAACCCAGTCTTCGATTCATCACTTTCACTAGAGGGAGAAGAGGATGCATTGGTACCTCACTTGGCACAAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACCACCAGGAACCCCAAAGATAGATTATTATAAAACCGATGAACTTTTTCTTTCAAAGCCATTACATCTGCATGCAGAGCCACGCTTATCCCATGTTATGTATTATTGA 1560 39.49 MAITFLAIILFIYSIIYAIKFSQYYLKGTPSIRRLPPGPKPWPLIGCLPAMLSNKNLPAYQWIHEVMKQFNTEIACIRLGSNTHIIPVASPELSLEFLNTHDSVFGSRSISMTAEIVSNGYLSTVLSPMGEQWKKMRKILASQVLNSSTLHRMLGQRTDEADILLRYIFGLTKNGEAINIRSIVRHYCGTVIRRMIFSRRYYGKGREDGGPSLEEEEHNQALLSILRHVNAFSISEFIPLLKTFDLDGHGKIVKRALKVIRNHDEPIIEERVQEWGDGKKKKVEDILDILISLKNENGKSLLSIEEIKAQVTDLQLASIDNPSNAVEWALAELLNQPKIIQQALEELDKVIGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNSDVFVAGYFIPKGSQVLLSRLGLGRNPRIWEDPMKFDPERHLKDGTVKFGISEPSLRFITFTRGRRGCIGTSLGTNITMMLFARLLQGFSWSLPPGTPKIDYYKTDELFLSKPLHLHAEPRLSHVMYY* 520
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 7160760 7162957 - CsaV3_5G011150.1 Csa05g00917 529304
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00917 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 517 - -
Csa05g00917 519 Gene3D Cytochrome P450 31 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 SUPERFAMILY Cytochrome P450 36 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 Pfam Cytochrome P450 36 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00917 519 PANTHER PHENYLALANINE N-MONOOXYGENASE 9 517 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03203 Csa-Chr1:28089423 Csa05g00917 Csa-Chr5:7160760 0 dispersed
Csa01g03204 Csa-Chr1:28120927 Csa05g00917 Csa-Chr5:7160760 0 dispersed
Csa01g03205 Csa-Chr1:28145052 Csa05g00917 Csa-Chr5:7160760 0 dispersed
Csa05g00917 Csa-Chr5:7160760 Csa03g00800 Csa-Chr3:6930394 1.83E-81 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00917 - K12153 csv:101216819 1038.1