Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00980 ATGGCTCCTCTCCTCTTCTTCCTCTCTACAATGCCCATTTCAAGCCTTTTTCTCCTTTTCTCTTTTCTTTCTCTGTTTCTCTCACCCCTTTCCGCCGCCGCTGACCGGAACTTCCTCCTCCTCCACCACCACCGTCACCACCGCCACCTTCTCCACCAACCCTTTTTCCCATGGACTTCTTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGTCTCAACCACAGCACCTACAGCCTAAACTCCCCTTTTCCTCCAACTCATTTTCCTCTCCCCCTAAACCCTTTTTTCCATCCTACCCTTCCTCGCCACCGCCGCCTCCCTCGCCTCCTTCGACGGCGCTTCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTCCCGCAGCCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTCGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTTTCGTTGCTCTGTTTTACTACTTTCGAAACCGGAACCGACAAGTCTCTGCTACTGATAAGGCCTCTAGAACTGATAATCTTCGGCTCTACCCTCCGGATATTGACACTTCTGATGGAGTTCATAAGAACAGAACCTCTTCCACTACCACCTCCAAGTTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAACAGGCTGCTGGAGCCGTGGAGGAGGGTGGTGGCGGAATCGTCGAGTCTGTTTCTCCAGTGAAAATGGGGTCGCCGGAGCTGAATCCCCTTCCACCGCTTCCCCGCCGGAATTTCGCAGACGATTATCGGAGGAATGCTGATGGTAATGATGATGATGATGATGACTACGATCGCGACGACGAAGAGTTTTTTTCACCAAGAGGGTCTTCCGTCGGCGGTAAGGAGAATGTGGGGAGTAACAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTTTTGAGGAAAAGCTATAATTCCAGTTTGAATTCTGGTTCTCCCTCTGTTTCTCTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACTAGCTTGAGATCAAAGTCTCCGGACTCCATTATTAGATTCCCTGTTCCTTTACGGCCATTGCCAACGCTTCCAGTACCACCATCACCGTCGTTCTCCTCTGCTTCTTCGCCACTGGGAGGTTCTGGGAACACTAAGAACTCGCCATCGAGGGATTCTGATTTTCCGGAGCTGCCTCGGCAGTTTTCAGATGGATCTAGGATGGATTACCAGCAACCATTGCCAGTGAAACTACCAACAGCCCCTCCTCTGCGTCCGCCACCGCCACCTCCTCCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCAGTACTCACCGTGCCAACAAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGAGAGCAATCAAACACCATTGTAGATGCAGAGAGAGCGGAAGAAACTTTGAAGCCGAAACTGAAGGCATTGCATTGGGACAAAGTTCGGATGAGCTCTGATCGAGCAATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAATCATAATTCCAATATCATGAGCAAAGAAAATGGTAGTGTTCATCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATAGAAGAGGTCTTAGAAGCCCTTTTGGAAGGAAACTCAGATGCGCTGTGTACTGAACTGCTCGAAAGTTTACTGAAAATGGCGCCAACCGAAGAAGAAGAGCGTAGTTTGAAAGAATACAAAGACGATTCACCTTTTAAACTTGGCCCAGCCGAGAAATTCCTCAAGGTAGTTCTTGATATACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATGGCCAATTTCGATTCTGAGGTTGAGTACCTCATTCGGTCCTTTACAACTCTTGAGGCTGCTTGTACAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGGATGAATGTAGGCACGGACAGAGGCGACGCACATGCTTTTAAACTTGACACTCTTCTCAAGCTTGTTGATATCAAGGGCACTGATGGAAAAACTACTCTCTTGCATTTTGTAGTACAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCCGACAACAACCTGACAGCTGATAATACTCAGCAATCTTCCTTAACAAATGACGTCGAGTTTCGAAAGCTTGGTCTTCAAGTCGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAAAAAGCTGCATTAATGGATGCAGATGTACTTATCCACGACATAGGGAAACTTGCTGGAGGGATCACAAAAATCACAGAGGTCATTAGATTGAACGAAGACATGCTGAAAGGAGGGAGTCGGTCGAATTTCTCTGATGCCATGAACAAGTTCTTGGGCAAGGCAGCAGAAGAAGTATCAAGGATACAAGTTCAAGAAGGCATTGTCCTCACCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACCTAGCAAAAGAAGAAGCTCGGCCGCTGCGCATTTTTATGGTGGTAAAGGATTTTCTTGCCATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTATGAATCCATGTCTTCCATCGGTTTTCCCCGGATTATGCGAAAGCCAGCGCTATGGTTCGTCTGATGACGATAGTTCATCTTCCTCATCATAG 2883 46.17 MAPLLFFLSTMPISSLFLLFSFLSLFLSPLSAAADRNFLLLHHHRHHRHLLHQPFFPWTSLPPSQAPSSLSPLSQPQHLQPKLPFSSNSFSSPPKPFFPSYPSSPPPPPSPPSTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFFVALFYYFRNRNRQVSATDKASRTDNLRLYPPDIDTSDGVHKNRTSSTTTSKFLYLGTLATSREIDEQAAGAVEEGGGGIVESVSPVKMGSPELNPLPPLPRRNFADDYRRNADGNDDDDDDYDRDDEEFFSPRGSSVGGKENVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSLPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSFSSASSPLGGSGNTKNSPSRDSDFPELPRQFSDGSRMDYQQPLPVKLPTAPPLRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPTRPILSQNIAHMSAGEQSNTIVDAERAEETLKPKLKALHWDKVRMSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNHNSNIMSKENGSVHQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVLEALLEGNSDALCTELLESLLKMAPTEEEERSLKEYKDDSPFKLGPAEKFLKVVLDIPFAFKRVDAMLYMANFDSEVEYLIRSFTTLEAACTELKNSRMFLKLLEAVLKTGNRMNVGTDRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDNNLTADNTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLIHDIGKLAGGITKITEVIRLNEDMLKGGSRSNFSDAMNKFLGKAAEEVSRIQVQEGIVLTMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPMNPCLPSVFPGLCESQRYGSSDDDSSSSSS* 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8967816 8973248 - CsaV3_5G012860.1 Csa05g00980 529367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00980 960 ProSiteProfiles Formin homology-2 (FH2) domain profile. 497 931 IPR015425 -
Csa05g00980 960 MobiDBLite consensus disorder prediction 241 305 - -
Csa05g00980 960 SUPERFAMILY Formin homology 2 domain (FH2 domain) 438 918 - -
Csa05g00980 960 SMART it6_source 497 920 IPR015425 -
Csa05g00980 960 MobiDBLite consensus disorder prediction 328 358 - -
Csa05g00980 960 Gene3D Formin, FH2 domain 495 915 IPR042201 -
Csa05g00980 960 MobiDBLite consensus disorder prediction 428 450 - -
Csa05g00980 960 MobiDBLite consensus disorder prediction 385 406 - -
Csa05g00980 960 MobiDBLite consensus disorder prediction 377 452 - -
Csa05g00980 960 PANTHER FORMIN-LIKE PROTEIN 2 41 957 - -
Csa05g00980 960 PANTHER FORMIN-RELATED 41 957 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Csa05g00980 960 Pfam Formin Homology 2 Domain 500 905 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02771 Csa-Chr1:24487800 Csa05g00980 Csa-Chr5:8967816 2.60E-124 dispersed
Csa03g02718 Csa-Chr3:25959151 Csa05g00980 Csa-Chr5:8967816 3.89E-17 dispersed
Csa05g00980 Csa-Chr5:8967816 Csa06g02244 Csa-Chr6:20168345 1.81E-84 dispersed
Csa05g00980 Csa-Chr5:8967816 Csa02g01413 Csa-Chr2:13503958 2.91E-171 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00980 - - csv:101213912 1498.03