Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01053 ATGGGGTTTAAAGAAGTCTTATTACTTTTGTACATAACAATGCTTACAACTTCAAGTGTTGCTATGGATCAACAAACATACATAGTTCACATGGACACCACCAAGATGGACACCCCCAACCCTGAACAATGGTACACAGCCATCATTGATTCAGTCAACCAACTCTCATCTCTCTATGGCGACAACAACGACGATGAAGAAGCATTGAATGCTGCCGAGATTCTCTATGTCTATAAAACTGTCATTTCAGGTTTTTCTGCAAAGCTCTCCTCGAGAAACCTTCATTCTTTAAGCAAAGTTCCAGGTTTTGTAGCAGCCACTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTCAGTTTCTTGGCCTTCAAAGAGGCCATGGCCTTTGGAATTCTTCAAACTTAGCTTCTGATATTATTATTGGTGTACTCGACACTGGCATTTGGCCTGAGCATATAAGTTTTCAGGACAAAGGTCTCCCCCCTGTTCCCTCAAAGTGGAAAGGCATTTGCCAAACAGGTCCGAACTTCTCACATTCAAATTGTAACAAAAAACTCATTGGAGCAAGAACCTTCATTCAAGCCTATGAGGCTGCTGTCGGTAGATTGAATGGAACAGGGATATTTCGATCCGCACGAGACTCGAATGGCCACGGCACACACACAGCATCAACTGCTGCTGGAAATTTTATAAACAGAGCAAGCTTTTATAACCAAGGCATGGGAGTAGCCACAGGAATGAGGTTCACTTCAAGGATCGCATCATACAAGGTATGTTGGCCAGAAGGATGTGCAAGTGCTGATATTTTGGCAGCCATGGATCACGCTGTTGCTGACGGTGTTGATGTTCTATCGATCTCCTTAGGCGGCGGTTCTAGTATAATTTACAGCGATCAAATTGCCATAGCTGCATTTGGTGCTATTCAAAAAGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTCATCTCGACTGTTAGTAATGTAGCACCATGGGTCATGACTGTTGCTGCTAGTTACACAGATAGAACCTTCCCAACCACTGTAAGGCTTGGAAATGGAAAGGTTTTCGAAGGTTCTTCTTCGTATTTTGGCAAGAACTTAAAGGAAGTCCCACTTGTTTATAACAATACTGCTGGTGATGGACAAGAAACAAATTTTTGTACTGCTGGTTCACTTGACCCAACAATGGTAAGGGGAAAAATTGTTGTGTGTGAAAGAGGAACAAACTCAAGAACTAAAAAAGGAGAGCAAGTGAAATTAGCTGGAGGAGCTGGAATGATTCTAATCAACACAATACTTGAAGGTGAAGATCTTTTAGCTGATTCTCATGTTTTGCCAGCCACTTCTGTTGGAGCTTCGGCTGCCAAATCCATCTTAAACTACATAGCTTCCTCAAAACGTCAAGCGAAAGCATCAATCATTTTCAAAGGGACTAAATATGGAAGCCGAGCACCGAGAGTAGCGGCATTTTCTTCTCGAGGGCCAAGTTTTTTTAAACCATACGTGATAAAGCCAGACATAACTGCGCCTGGTGTTAATATATTGGCTGCTTGGCCGCCGATTGTGAGCCCGAGTGAGCTTGAGTCTGACAAAAGAAGAGTGTTGTTCAATATTATTTCAGGGACTTCTATGTCTTGCCCTCATGTTAGCGGTTTAGCTGCATTGGTTAAATCAGTTCACAAGGATTGGTCGCCTGCCGCCATTAAATCGGCGCTCATGACAACAGCTTATGTTACTGATAACAAAAAGCATCTCATTTCGGACGTCGGTCGTGCTAGTGGTGGTCCTGCGGATTCTTTTGCGTTTGGTTCTGGCCATGTCGATCCTGAGAAAGCTTCTCATCCAGGGCTCATCTACGATATCGCACCCCAAGACTACATAACCTACTTGTGTAGCTTAAAGTATACTTCAACACAAATTTCTTTAGTTTCAAGAGGGAAGTTCACATGTTCATCAAAAAACACGTTTTCTCAGCCAGGAGACTTGAATTACCCTTCTTTCTCTGTGTTCATGAAGAAGGGAAAAAATGTTAATAGCACATTCAAGAGAACAGTGACAAATGTTGGTATCCCAAGGAGTGATTATACTGTAAGAATTAACAATCCAAAAGGAATAAGAATTATTGTGAAACCTGAGAAGTTGAATTTTGTGAAATTGGGAGAAAAGTTGAGTTACAAAGTGAGTTTTTATGCATTGGGGAAAAGAGAAAGTTTGGATGAGTTTTCCTTTGGATCTCTTGTTTGGCACTCAGGAACATATGCTGTTAGAAGTCCTATAGCAGTAACATGGCAGTAG 2310 42.12 MGFKEVLLLLYITMLTTSSVAMDQQTYIVHMDTTKMDTPNPEQWYTAIIDSVNQLSSLYGDNNDDEEALNAAEILYVYKTVISGFSAKLSSRNLHSLSKVPGFVAATPNELLQLHTTHSPQFLGLQRGHGLWNSSNLASDIIIGVLDTGIWPEHISFQDKGLPPVPSKWKGICQTGPNFSHSNCNKKLIGARTFIQAYEAAVGRLNGTGIFRSARDSNGHGTHTASTAAGNFINRASFYNQGMGVATGMRFTSRIASYKVCWPEGCASADILAAMDHAVADGVDVLSISLGGGSSIIYSDQIAIAAFGAIQKGVFVSCSAGNSGPFISTVSNVAPWVMTVAASYTDRTFPTTVRLGNGKVFEGSSSYFGKNLKEVPLVYNNTAGDGQETNFCTAGSLDPTMVRGKIVVCERGTNSRTKKGEQVKLAGGAGMILINTILEGEDLLADSHVLPATSVGASAAKSILNYIASSKRQAKASIIFKGTKYGSRAPRVAAFSSRGPSFFKPYVIKPDITAPGVNILAAWPPIVSPSELESDKRRVLFNIISGTSMSCPHVSGLAALVKSVHKDWSPAAIKSALMTTAYVTDNKKHLISDVGRASGGPADSFAFGSGHVDPEKASHPGLIYDIAPQDYITYLCSLKYTSTQISLVSRGKFTCSSKNTFSQPGDLNYPSFSVFMKKGKNVNSTFKRTVTNVGIPRSDYTVRINNPKGIRIIVKPEKLNFVKLGEKLSYKVSFYALGKRESLDEFSFGSLVWHSGTYAVRSPIAVTWQ* 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10486590 10491550 - CsaV3_5G013680.1 Csa05g01053 529440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01053 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 115 IPR037045 -
Csa05g01053 769 SUPERFAMILY Subtilisin-like 114 622 IPR036852 GO:0004252|GO:0006508
Csa05g01053 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Csa05g01053 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 17 769 - -
Csa05g01053 769 Pfam Subtilase family 139 609 IPR000209 GO:0006508|GO:0008236
Csa05g01053 769 Gene3D Peptidase S8/S53 domain 140 631 IPR036852 GO:0004252|GO:0006508
Csa05g01053 769 Pfam PA domain 375 462 IPR003137 -
Csa05g01053 769 ProSiteProfiles Serine proteases, subtilase domain profile. 122 618 - -
Csa05g01053 769 CDD PA_subtilisin_like 352 471 - -
Csa05g01053 769 Pfam Fibronectin type-III domain 666 766 IPR041469 -
Csa05g01053 769 Pfam Peptidase inhibitor I9 26 115 IPR010259 -
Csa05g01053 769 CDD Peptidases_S8_3 112 582 IPR034197 -
Csa05g01053 769 Gene3D - 635 768 - -
Csa05g01053 769 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Csa05g01053 769 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Csa05g01053 769 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Csa05g01053 769 Gene3D - 346 485 - -
Csa05g01053 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 769 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02634 Csa-Chr3:24842049 Csa05g01053 Csa-Chr5:10486590 0 dispersed
Csa05g00344 Csa-Chr5:2210324 Csa05g01053 Csa-Chr5:10486590 0 dispersed
Csa05g00348 Csa-Chr5:2230560 Csa05g01053 Csa-Chr5:10486590 0 dispersed
Csa05g01053 Csa-Chr5:10486590 Csa07g02314 Csa-Chr7:21479271 0 dispersed
Csa05g01053 Csa-Chr5:10486590 Csa05g01054 Csa-Chr5:10498977 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01053 - - csv:101222234 1526.53