Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01054 ATGGGGTTTAGAGAGGTTTGGGTGTTGTTGTCAATAATGCTTGCAGTTTCAAGTGCTGTTGTGGATCAACAGACTTACATTATTCACATGGACGCCACAAAGATGGTCACCCCCATCCCTGAACAATGGTACACAGACATTATTGATTCTGTCAATAAACTCTCGTCTCTCGATGACAACGAAGAAGAAGCATCAAATGCTGCAGAGATTCTCTACGTTTACAAAACTGCCCTGTCTGGTTTTGCTGCAAAACTCACCTCAAAAAAGCTTCATTCTTTAAGCAAAATTCCAGGGTTTCTAGCAGCCACTCCAAATGAACTACTACAACTTCACACCACTCACTCTCCTCAGTTTCTTGGCCTACAAAGAGACCATGGCCTTTGGAATTCCTCAAACCTAGCTTCTGATATAATTATTGGTTTGCTTGACACTGGCGTTTGGCCTGAGCATATAAGTTTTCAAGACGAGAGTCTTTCCTCTGTGCCCTTAAAATGGAAAGGCATTTGCCAAACAGGCCCAAGGTTCTCTTCTTCTAATTGTAACAAAAAGCTCATTGGAGCAAGTTTCTACATTAAAGGATACGAGGCGATCGTCGGTAGATTGAACGAAACAGGGATATTCCGATCCCCCCGAGACTCTAATGGCCACGGTACACACACGGCTTCAACTGCTGCAGGAAGCATTGTTAATAACGCAAGCTTTTTTAACCAAGGCATGGGAGTAGCCTCTGGAATTAGGTTCACCTCAAGAATCGTAGCATACAAAGTATGTTGGCCTCTAGGCTGTGCCAATGCCGATATTCTCGCAGCCATGGACAGCGCCGTTGCCGATGGAGTCGATGTTCTATCACTCTCTTTGGGAGGCGGTTCTAGTTCTTTTTACAAAGATAACATTGCCATAGCTGCATTTGGTGCTATTGAAAAAGGGGTTTTTGTTTCATGTTCAGCCGGTAATTCTGGTCCGTCACCCTCAACTGTTGGTAATGCAGCCCCATGGATCATGACAGTCGCTGCTAGTTACACAGACAGAACTTTTCCAACCACTGTCAAGCTTGGAAATGGGCAAGTTTTTGAAGGATCTTCTTTGTATTATGGCAAGAGCATAAATGAACTCCCACTTGTTTATAACAATACTGCTGGTGATGGACAAGAAACAAATTTTTGCATTGCTGGTTCCCTTGACCCATCAATGGTGAAGGGAAAAATTGTTGTATGTGAAAGAGGACAAATTTCAAGAACTGAAAAAGGCGAGCAAGTGAAGTTAGCTGGAGGAGCTGGAATGATTTTAATTAATACAGAATTTGAAGGTGAAGAGCTTTTTGCTGACCCTCATATTTTGCCAGCCACTACTCTTGGAGCTTTAGCTGGCAAAGCCATCTTAGACTATACAGCATCCTCAAAAACACAAGCGAAAGCTTTGATTGTGTTCGAAGGGACTAAATATGGAAGTCAAGCACCGAGAGTGGCTGCATTTTCTTCTCGAGGGCCAAGTTTAGTTGGACCTGATGTTATAAAGCCAGACGTAACTGCACCTGGTGTTAATATATTAGCCGCTTGGCCTCCAATTGTTAGCCCGAGTGAGCTAGAGTCTGATACAAGAAGAGTGTTGTTCAACATCATTTCAGGGACTTCTATGTCTTGCCCTCATGTTAGTGGTTTAGCTGCTTTACTTAAATCGGCTCACAACGATTGGTCACCTGCTGCGATTAAATCTGCGCTTATGACCACCGCCTACATTACTGACAACAAAATGAGTCTCATTTCCGACGTCGGTCAAGCTAATGGCGAACCGGCAACCCCCTTTACATTTGGTTCTGGCCATGTTGATCCCGAGAAAGCATCGGATCCCGGGCTCATCTACGATATCACACCCCAAGATTACATAAACTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCACGAGGGAATTTTACTTGTTCATCAAAAAGAACAGTTGTTAAGCCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAAAGTTAGTATTACATTGAAAAGAACGGTGACAAATGTTGGTATCTCAAGGAGTGATTACACTGTTAAAATCAACAATCCAAAAGGAATAACAGTTATTGTGAAGCCTGAAAAGTTAAGTTTTGGGAGTTTGGGAGAGCAGTTGAGTTACCAAGTGAGATTTGTTTCATTAGGAGGAAAGGAAGCTTTGGATACGTTTTCTTTTGGATCTCTTGTTTGGATCTCAGGAAAATATGCTGTTAGAAGTCCTATAGCAGTAACTTGGCAATAG 2301 42.5 MGFREVWVLLSIMLAVSSAVVDQQTYIIHMDATKMVTPIPEQWYTDIIDSVNKLSSLDDNEEEASNAAEILYVYKTALSGFAAKLTSKKLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRDHGLWNSSNLASDIIIGLLDTGVWPEHISFQDESLSSVPLKWKGICQTGPRFSSSNCNKKLIGASFYIKGYEAIVGRLNETGIFRSPRDSNGHGTHTASTAAGSIVNNASFFNQGMGVASGIRFTSRIVAYKVCWPLGCANADILAAMDSAVADGVDVLSLSLGGGSSSFYKDNIAIAAFGAIEKGVFVSCSAGNSGPSPSTVGNAAPWIMTVAASYTDRTFPTTVKLGNGQVFEGSSLYYGKSINELPLVYNNTAGDGQETNFCIAGSLDPSMVKGKIVVCERGQISRTEKGEQVKLAGGAGMILINTEFEGEELFADPHILPATTLGALAGKAILDYTASSKTQAKALIVFEGTKYGSQAPRVAAFSSRGPSLVGPDVIKPDVTAPGVNILAAWPPIVSPSELESDTRRVLFNIISGTSMSCPHVSGLAALLKSAHNDWSPAAIKSALMTTAYITDNKMSLISDVGQANGEPATPFTFGSGHVDPEKASDPGLIYDITPQDYINYLCSLKYNSTQIALVSRGNFTCSSKRTVVKPGDLNYPSFSVFMKKKAKKVSITLKRTVTNVGISRSDYTVKINNPKGITVIVKPEKLSFGSLGEQLSYQVRFVSLGGKEALDTFSFGSLVWISGKYAVRSPIAVTWQ* 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10498977 10504303 - CsaV3_5G013690.1 Csa05g01054 529441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01054 766 CDD PA_subtilisin_like 348 468 - -
Csa05g01054 766 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Csa05g01054 766 SUPERFAMILY PA domain 370 448 IPR046450 -
Csa05g01054 766 Gene3D - 631 765 - -
Csa05g01054 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 16 766 - -
Csa05g01054 766 Pfam Fibronectin type-III domain 662 763 IPR041469 -
Csa05g01054 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 111 IPR037045 -
Csa05g01054 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 766 IPR045051 -
Csa05g01054 766 Pfam Peptidase inhibitor I9 25 111 IPR010259 -
Csa05g01054 766 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Csa05g01054 766 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Csa05g01054 766 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Csa05g01054 766 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Csa05g01054 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Csa05g01054 766 CDD Peptidases_S8_3 108 578 IPR034197 -
Csa05g01054 766 Gene3D - 342 481 - -
Csa05g01054 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Csa05g01054 766 Pfam PA domain 372 459 IPR003137 -
Csa05g01054 766 Pfam Subtilase family 135 606 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01896 Csa-Chr2:17942953 Csa05g01054 Csa-Chr5:10498977 3.40E-178 dispersed
Csa05g01054 Csa-Chr5:10498977 Csa06g02998 Csa-Chr6:25857587 0 dispersed
Csa05g01053 Csa-Chr5:10486590 Csa05g01054 Csa-Chr5:10498977 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01054 - - csv:101210266 1490.71