Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g01055 | ATGTCAATATCAAAATTTTCTTCTGTTTTCATCATCGTTCTTTTCTATATCGCCGGATGCGTTGCTGCGGTAGAAATCGTCGAGGACAAGAAACATTTTATCGTCTTTATGGAGAATAGACCAACTATTTTAAATGAAGTCGATGGCTTAGATACAAATCTCAATGTTCTCATGTCAGTGAAGGAAAGCCATGTGGATGCAAAAGACTGTATGGTGCATAGTTACACAAATAACTTCAATGCCTTCGCTGCGAAGCTTACTGAGGCGGAGGCCAAAACATTGTCAGAGAGGGGGGATGTGCAGCATGTGATTCCAAATAGATACAGAAAGCTACAAACAACACGATCTTGGGACTTCCTTGGATTTCCTATCAATGCAAAGAGGAAGACAAGACAGGAGAGTGACATTATTGTTGGCCTATTTGATACTGGAATTACTCCAACGGCTGATAGCTTTAAAGATGATGGGTATGGTCCTCCACCCAAAAAATGGAAAGGCACATGTGACCATTTTGCCAATTTCAGTGGCTGCAACAATAAACTCATCGGAGCAAGATATTTCAAACTTGATGGCATCACCGAGCCCTTCGACATTTTGTCGCCCGTAGACGTTAACGGTCATGGCACACACACATCGTCAACAGCGACCGGCAATGTAATCACTGGAGCCAACCTCTCTGGCCTGGCTCAAGGAACTGCCCCTGGCGGTGTGCCATCGGCCAGACTAGCCATGTACAAGGTTTGCTGGATGAGCAACGGATGCTCCGATATGGATCTTCTGGCTGCCTTCGACGCCGCCATACAGGATGGTGTCGATGTCATTTCAATATCGATTGCTGGCATTGGATATGGCAATTACACTGACGACCCGATCTCTATCGGTGCATTTCATGCCATGAAGAAGGGCATCATCACTGTGACGGCCGCCGGGAACAATGGCCCGAGTGCCGGCACTGTTGTGAACCACGCGCCGTGGATCTTGACGGTTGCTGCCAGTTCAATTGATCGGAGATTTATCAGCCCAGTCGAGTTGGGCAACGGGAAGAACATCTCTGGGGTAGGAATAAACTTATTCAATCCAGAGAAAAAAATGTACAAATTAGTGAGTGGAGAAGATGTGGCAAAGAACATAGAGGGCAAAGATAATGCAATGTATTGTGAAGACAAGTCACTTGATCCAAGCAAGGTGAAAGACAGTCTTGTGTTTTGCAAATTGATGACATGGGGAGCTGATTCTACTGTCAAATCAATTGGTGCTGCTGGTGCTATCCTTCAAAGTGATCAGTTTCTTGACAATACTGATATCTTCATGGCCCCTTCCGCTTTGGTTAGTAGCTTTGTTGGAGCTACTATTGACGCCTACATCCACTCCACAAGAACACCAACAGCAGTAATATACAAAACAAGACAACACAGAGCAGCAGCTCCAATTATCGCTCCCTTCTCATCCAGAGGCCCAAATCCAGGCTCCACCCACATTCTAAAGCCGGACATAGCAGCACCAGGAGTCAACATATTGGCGGGTTACACGCCATTGAAGTCATTGACGGGGCTGAAAGGTGACACTCAATTCTCTAAATTCACACTCATGTCTGGCACTTCCATGGCTTGTCCCCACGTTGCCGCTGCCGCCGCCTATGTCAAATCTTTCCACCCTCTTTGGTCTCCGGCTGCCATTAGATCCGCCTTGCTTACTACCGCGAAACCAATTAGTCGACGTGGGAACCCTGACGGAGAATTCGGATATGGTGCCGGCAACCTTAATCCACGTAAAGCCAAAAACCCTGGCCTAATCTACGACCTCAATGAGATGTCATACATTCAATTCCTTTGTAGGGAAGGTTACAGTGGATCTTCAATTATCATCCTCACTGGAACCAAATCCATCAATTGCGCCACAATAATCCCTGGCGAAGGCTATGACTCTCTCAATTACCCAACCTTTCAACTCAGCCTCCAAAGCTCCCGAGAACCGACGACCGCCGTGTTCTGGCGGGAAGTGACCAATGTCGGCAAGCCTGTTTCAGTTTACAATGCCACGGTCAGGGCTCCCCCTGGGGTAGAGATCACGGTAGAGCCTGCGACTTTGTCGTTCTCCTACCTACATCAAAAGGAGAGGTTTAAGGTTGTTGTGAAGGCCAATCCTTTACCGGCGAACAAAATGGTATCGGGTTCGATCACTTGGTTTGATCCTCGATATGTTGTGAGGAGTCCGGTTGTTGTTTATAGTCCGTCGGGATGA | 2241 | 47.21 | MSISKFSSVFIIVLFYIAGCVAAVEIVEDKKHFIVFMENRPTILNEVDGLDTNLNVLMSVKESHVDAKDCMVHSYTNNFNAFAAKLTEAEAKTLSERGDVQHVIPNRYRKLQTTRSWDFLGFPINAKRKTRQESDIIVGLFDTGITPTADSFKDDGYGPPPKKWKGTCDHFANFSGCNNKLIGARYFKLDGITEPFDILSPVDVNGHGTHTSSTATGNVITGANLSGLAQGTAPGGVPSARLAMYKVCWMSNGCSDMDLLAAFDAAIQDGVDVISISIAGIGYGNYTDDPISIGAFHAMKKGIITVTAAGNNGPSAGTVVNHAPWILTVAASSIDRRFISPVELGNGKNISGVGINLFNPEKKMYKLVSGEDVAKNIEGKDNAMYCEDKSLDPSKVKDSLVFCKLMTWGADSTVKSIGAAGAILQSDQFLDNTDIFMAPSALVSSFVGATIDAYIHSTRTPTAVIYKTRQHRAAAPIIAPFSSRGPNPGSTHILKPDIAAPGVNILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTAKPISRRGNPDGEFGYGAGNLNPRKAKNPGLIYDLNEMSYIQFLCREGYSGSSIIILTGTKSINCATIIPGEGYDSLNYPTFQLSLQSSREPTTAVFWREVTNVGKPVSVYNATVRAPPGVEITVEPATLSFSYLHQKERFKVVVKANPLPANKMVSGSITWFDPRYVVRSPVVVYSPSG* | 747 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10517396 | 10524680 | - | CsaV3_5G013700.1 | Csa05g01055 | 529442 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g01055 | 746 | Gene3D | Peptidase S8/S53 domain | 135 | 606 | IPR036852 | GO:0004252|GO:0006508 | |
Csa05g01055 | 746 | Pfam | Fibronectin type-III domain | 643 | 741 | IPR041469 | - | |
Csa05g01055 | 746 | Pfam | Peptidase inhibitor I9 | 57 | 111 | IPR010259 | - | |
Csa05g01055 | 746 | SUPERFAMILY | Subtilisin-like | 111 | 597 | IPR036852 | GO:0004252|GO:0006508 | |
Csa05g01055 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Csa05g01055 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 203 | 216 | IPR015500 | - | |
Csa05g01055 | 746 | PRINTS | Subtilisin serine protease family (S8) signature | 531 | 547 | IPR015500 | - | |
Csa05g01055 | 746 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 112 | IPR037045 | - | |
Csa05g01055 | 746 | Gene3D | - | 335 | 471 | - | - | |
Csa05g01055 | 746 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 33 | 741 | IPR045051 | - | |
Csa05g01055 | 746 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.14 | 33 | 741 | - | - | |
Csa05g01055 | 746 | Gene3D | - | 610 | 744 | - | - | |
Csa05g01055 | 746 | CDD | Peptidases_S8_3 | 110 | 567 | IPR034197 | - | |
Csa05g01055 | 746 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 116 | 593 | - | - | |
Csa05g01055 | 746 | CDD | PA_subtilisin_like | 342 | 465 | - | - | |
Csa05g01055 | 746 | Pfam | Subtilase family | 134 | 583 | IPR000209 | GO:0006508|GO:0008236 | |
Csa05g01055 | 746 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 532 | 542 | IPR023828 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g01055 | Csa-Chr5:10517396 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g01055 | Csa-Chr5:10517396 | Csa05g01060 | Csa-Chr5:10608689 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g01055 | - | - | csv:101222470 | 1365.13 |