Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01055 ATGTCAATATCAAAATTTTCTTCTGTTTTCATCATCGTTCTTTTCTATATCGCCGGATGCGTTGCTGCGGTAGAAATCGTCGAGGACAAGAAACATTTTATCGTCTTTATGGAGAATAGACCAACTATTTTAAATGAAGTCGATGGCTTAGATACAAATCTCAATGTTCTCATGTCAGTGAAGGAAAGCCATGTGGATGCAAAAGACTGTATGGTGCATAGTTACACAAATAACTTCAATGCCTTCGCTGCGAAGCTTACTGAGGCGGAGGCCAAAACATTGTCAGAGAGGGGGGATGTGCAGCATGTGATTCCAAATAGATACAGAAAGCTACAAACAACACGATCTTGGGACTTCCTTGGATTTCCTATCAATGCAAAGAGGAAGACAAGACAGGAGAGTGACATTATTGTTGGCCTATTTGATACTGGAATTACTCCAACGGCTGATAGCTTTAAAGATGATGGGTATGGTCCTCCACCCAAAAAATGGAAAGGCACATGTGACCATTTTGCCAATTTCAGTGGCTGCAACAATAAACTCATCGGAGCAAGATATTTCAAACTTGATGGCATCACCGAGCCCTTCGACATTTTGTCGCCCGTAGACGTTAACGGTCATGGCACACACACATCGTCAACAGCGACCGGCAATGTAATCACTGGAGCCAACCTCTCTGGCCTGGCTCAAGGAACTGCCCCTGGCGGTGTGCCATCGGCCAGACTAGCCATGTACAAGGTTTGCTGGATGAGCAACGGATGCTCCGATATGGATCTTCTGGCTGCCTTCGACGCCGCCATACAGGATGGTGTCGATGTCATTTCAATATCGATTGCTGGCATTGGATATGGCAATTACACTGACGACCCGATCTCTATCGGTGCATTTCATGCCATGAAGAAGGGCATCATCACTGTGACGGCCGCCGGGAACAATGGCCCGAGTGCCGGCACTGTTGTGAACCACGCGCCGTGGATCTTGACGGTTGCTGCCAGTTCAATTGATCGGAGATTTATCAGCCCAGTCGAGTTGGGCAACGGGAAGAACATCTCTGGGGTAGGAATAAACTTATTCAATCCAGAGAAAAAAATGTACAAATTAGTGAGTGGAGAAGATGTGGCAAAGAACATAGAGGGCAAAGATAATGCAATGTATTGTGAAGACAAGTCACTTGATCCAAGCAAGGTGAAAGACAGTCTTGTGTTTTGCAAATTGATGACATGGGGAGCTGATTCTACTGTCAAATCAATTGGTGCTGCTGGTGCTATCCTTCAAAGTGATCAGTTTCTTGACAATACTGATATCTTCATGGCCCCTTCCGCTTTGGTTAGTAGCTTTGTTGGAGCTACTATTGACGCCTACATCCACTCCACAAGAACACCAACAGCAGTAATATACAAAACAAGACAACACAGAGCAGCAGCTCCAATTATCGCTCCCTTCTCATCCAGAGGCCCAAATCCAGGCTCCACCCACATTCTAAAGCCGGACATAGCAGCACCAGGAGTCAACATATTGGCGGGTTACACGCCATTGAAGTCATTGACGGGGCTGAAAGGTGACACTCAATTCTCTAAATTCACACTCATGTCTGGCACTTCCATGGCTTGTCCCCACGTTGCCGCTGCCGCCGCCTATGTCAAATCTTTCCACCCTCTTTGGTCTCCGGCTGCCATTAGATCCGCCTTGCTTACTACCGCGAAACCAATTAGTCGACGTGGGAACCCTGACGGAGAATTCGGATATGGTGCCGGCAACCTTAATCCACGTAAAGCCAAAAACCCTGGCCTAATCTACGACCTCAATGAGATGTCATACATTCAATTCCTTTGTAGGGAAGGTTACAGTGGATCTTCAATTATCATCCTCACTGGAACCAAATCCATCAATTGCGCCACAATAATCCCTGGCGAAGGCTATGACTCTCTCAATTACCCAACCTTTCAACTCAGCCTCCAAAGCTCCCGAGAACCGACGACCGCCGTGTTCTGGCGGGAAGTGACCAATGTCGGCAAGCCTGTTTCAGTTTACAATGCCACGGTCAGGGCTCCCCCTGGGGTAGAGATCACGGTAGAGCCTGCGACTTTGTCGTTCTCCTACCTACATCAAAAGGAGAGGTTTAAGGTTGTTGTGAAGGCCAATCCTTTACCGGCGAACAAAATGGTATCGGGTTCGATCACTTGGTTTGATCCTCGATATGTTGTGAGGAGTCCGGTTGTTGTTTATAGTCCGTCGGGATGA 2241 47.21 MSISKFSSVFIIVLFYIAGCVAAVEIVEDKKHFIVFMENRPTILNEVDGLDTNLNVLMSVKESHVDAKDCMVHSYTNNFNAFAAKLTEAEAKTLSERGDVQHVIPNRYRKLQTTRSWDFLGFPINAKRKTRQESDIIVGLFDTGITPTADSFKDDGYGPPPKKWKGTCDHFANFSGCNNKLIGARYFKLDGITEPFDILSPVDVNGHGTHTSSTATGNVITGANLSGLAQGTAPGGVPSARLAMYKVCWMSNGCSDMDLLAAFDAAIQDGVDVISISIAGIGYGNYTDDPISIGAFHAMKKGIITVTAAGNNGPSAGTVVNHAPWILTVAASSIDRRFISPVELGNGKNISGVGINLFNPEKKMYKLVSGEDVAKNIEGKDNAMYCEDKSLDPSKVKDSLVFCKLMTWGADSTVKSIGAAGAILQSDQFLDNTDIFMAPSALVSSFVGATIDAYIHSTRTPTAVIYKTRQHRAAAPIIAPFSSRGPNPGSTHILKPDIAAPGVNILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTAKPISRRGNPDGEFGYGAGNLNPRKAKNPGLIYDLNEMSYIQFLCREGYSGSSIIILTGTKSINCATIIPGEGYDSLNYPTFQLSLQSSREPTTAVFWREVTNVGKPVSVYNATVRAPPGVEITVEPATLSFSYLHQKERFKVVVKANPLPANKMVSGSITWFDPRYVVRSPVVVYSPSG* 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10517396 10524680 - CsaV3_5G013700.1 Csa05g01055 529442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01055 746 Gene3D Peptidase S8/S53 domain 135 606 IPR036852 GO:0004252|GO:0006508
Csa05g01055 746 Pfam Fibronectin type-III domain 643 741 IPR041469 -
Csa05g01055 746 Pfam Peptidase inhibitor I9 57 111 IPR010259 -
Csa05g01055 746 SUPERFAMILY Subtilisin-like 111 597 IPR036852 GO:0004252|GO:0006508
Csa05g01055 746 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Csa05g01055 746 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Csa05g01055 746 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Csa05g01055 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 112 IPR037045 -
Csa05g01055 746 Gene3D - 335 471 - -
Csa05g01055 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 741 IPR045051 -
Csa05g01055 746 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 33 741 - -
Csa05g01055 746 Gene3D - 610 744 - -
Csa05g01055 746 CDD Peptidases_S8_3 110 567 IPR034197 -
Csa05g01055 746 ProSiteProfiles Serine proteases, subtilase domain profile. 116 593 - -
Csa05g01055 746 CDD PA_subtilisin_like 342 465 - -
Csa05g01055 746 Pfam Subtilase family 134 583 IPR000209 GO:0006508|GO:0008236
Csa05g01055 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01055 Csa-Chr5:10517396 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g01055 Csa-Chr5:10517396 Csa05g01060 Csa-Chr5:10608689 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01055 - - csv:101222470 1365.13