Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01060 ATGTCCATATCAAAATCTTCTCGTCTTCTTGTCTTTGCTCTTTTCATCGTCGTAGGATGCGTTGCAGGGTTGGACGAGGACGAGGAAAAGAATCATTATATTGTATTCTTGGAAAATAAACCAGTTTTAAATGAGGTTGATGTAGTAGAAACACATCTAAATCTTCTCATGTCAGTGAAGAAAAGCCATGCCGAAGCAAGTGAATCGATGGTTTATAGTTACACGAAAAGCTTCAATGCCTTTGCTGCTAAACTTAGTGATGATGAAGCCAAATTATTGTCAACCAGAAAAGATGTGCATCATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCTTGGGACTTCATTGGATTGTCTTCTAATGCAAGAAGAAGTACCAAACATGAGAGTGACATTATCGTGGGCTTATTCGATACCGGGATCACTCCAACGGCGGATAGCTTTAAAGATGATGGCTTCGGTCCTCCACCTAAAAAATGGAAAGGCACATGTCACCACTTTGCCAATTTCACTGCCTGCAATAAAAAACTTATCGGAGCAAGATATTTCAAGCTCGACGGCAATCCCGATCCCTCCGACATCTTGTCCCCGGTAGACACTGATGGCCATGGCACCCATACATCATCAACCGCAACGGGCAATGCAATTGCAGGGGCCAGCCTCTCTGGTCTGGCCGAAGGAACTGCCCGTGGTGGCGTGCCATCCGCGAGAGTTGCCATGTATAAGGTCTGCTGGACTAGTAGCGGGTGCTCCGATATGGATATTCTGGCCGCCTTTGACGCTGCTATACAGGATGGTGTTGATGTCATTTCGATATCAATCGGGGGAGGTGGCTTCAACAATTACTCCGATGACTCGATTTCCATCGGCGCATTTCATGCCATGAAGAAGGGTATCATCACTGTGACCTCCGCCGGGAACGGTGGTCCGACGGCCGGCAGTGTAGTCAACCACGCGCCTTGGATTGTGACGGTTGCTGCCAGTTCCATTGATCGGAAATTTATCAGCCCATTAGAGTTGGGCAATGGGAAGAACATCTCTGGAGTAGGGATAAACATCTTCAATCCAAAGCAAAAGATGTACCCATTAGTGAGTGGAGGGGATGTGGCAAGGAATTCAGAGAGCAAAGATACTGCAAGCTTTTGTCTAGAAGGCACACTTGATCCAACCAAAGTGAAAGGCAGCCTTGTTTTTTGCAAATTGTTAACTTGGGGAGCTGATTCTGTTATAAAATCCATTGGAGCAAATGGTGTTATCATTCAAAGTGATGAGTTTCTTGATAATGCTGATATCTTCATGGCCCCTGCCACCATGGTTAGCAGCTTGGTTGGTAATATTATTTACACCTACATCAAGTCCACCAGAACCCCAACTGCAGTGATATATAAAACAAAACAACTCAAAGCAAAAGCTCCAATGGTGGCTTCCTTCTCATCTAGAGGCCCAAACCCAGGCTCCCATCGCATTCTAAAGCCGGATATAGCAGCGCCAGGAGTGGACATATTGGCTGCTTATACGCCATTGAAGTCATTGACAGGGCAAAAGGGTGACACTCAATACTCCAAATTCACACTCATGTCCGGCACTTCCATGGCCTGCCCCCATGTCGCCGCTGCTGCCGCCTACGTCAAATCTTTCCATCCTCTTTGGTCTCCCGCCGCCATCAGATCCGCCTTGCTCACCACCGCGACACCGATTAGCCGACGACTGAACCCTGAGGGTGAATTTGCCTATGGTGCTGGCAACCTAAACCCATCAAGAGCCATAAGTCCTGGCTTAATCTACGATCTCAATGAAATCTCGTATATCCAATTCCTTTGCAGCGAAGGGTACACTGGATCTTCCATTGCTGTCCTCTCTGGAACCAAATCCATAAACTGTTCCAATCTAATCCCCGGCCAAGGACACGACTCACTCAATTATCCAACTTTTCAGCTCAGTCTCAAAAGCACCAACCAACCGATGACAACAACGTTCCGACGACGAGTCACAAACGTCGGCCATCCTATCTCTGTCTACAATGCGACCATCAATGCTCCTCCTGGAGTGACGATCACGGTTACGCCCCCCACTCTATCATTTTCACGGTTACTTCAGAAGAGGAGTTTTAAAGTTGTTGTGAAGGCCAGTCCTTTGCCATCGGCAAAAATGGTGTCCGGATCACTTGCTTGGGTTGGTGCTCAACATGTTGTGAGAAGTCCTATTGTTGTTTATAGTCCATGA 2232 46.77 MSISKSSRLLVFALFIVVGCVAGLDEDEEKNHYIVFLENKPVLNEVDVVETHLNLLMSVKKSHAEASESMVYSYTKSFNAFAAKLSDDEAKLLSTRKDVHHVIPNKYRKLQTTRSWDFIGLSSNARRSTKHESDIIVGLFDTGITPTADSFKDDGFGPPPKKWKGTCHHFANFTACNKKLIGARYFKLDGNPDPSDILSPVDTDGHGTHTSSTATGNAIAGASLSGLAEGTARGGVPSARVAMYKVCWTSSGCSDMDILAAFDAAIQDGVDVISISIGGGGFNNYSDDSISIGAFHAMKKGIITVTSAGNGGPTAGSVVNHAPWIVTVAASSIDRKFISPLELGNGKNISGVGINIFNPKQKMYPLVSGGDVARNSESKDTASFCLEGTLDPTKVKGSLVFCKLLTWGADSVIKSIGANGVIIQSDEFLDNADIFMAPATMVSSLVGNIIYTYIKSTRTPTAVIYKTKQLKAKAPMVASFSSRGPNPGSHRILKPDIAAPGVDILAAYTPLKSLTGQKGDTQYSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTATPISRRLNPEGEFAYGAGNLNPSRAISPGLIYDLNEISYIQFLCSEGYTGSSIAVLSGTKSINCSNLIPGQGHDSLNYPTFQLSLKSTNQPMTTTFRRRVTNVGHPISVYNATINAPPGVTITVTPPTLSFSRLLQKRSFKVVVKASPLPSAKMVSGSLAWVGAQHVVRSPIVVYSP* 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10608689 10615608 + CsaV3_5G013840.1 Csa05g01060 529447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01060 743 ProSiteProfiles Serine proteases, subtilase domain profile. 115 592 - -
Csa05g01060 743 CDD PA_subtilisin_like 341 464 - -
Csa05g01060 743 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Csa05g01060 743 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Csa05g01060 743 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Csa05g01060 743 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Csa05g01060 743 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Csa05g01060 743 Gene3D - 334 470 - -
Csa05g01060 743 CDD Peptidases_S8_3 109 567 IPR034197 -
Csa05g01060 743 SUPERFAMILY Subtilisin-like 117 592 IPR036852 GO:0004252|GO:0006508
Csa05g01060 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Csa05g01060 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 741 IPR045051 -
Csa05g01060 743 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 32 741 - -
Csa05g01060 743 Pfam Fibronectin type-III domain 642 740 IPR041469 -
Csa05g01060 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Csa05g01060 743 Pfam Subtilase family 133 584 IPR000209 GO:0006508|GO:0008236
Csa05g01060 743 Gene3D - 609 742 - -
Csa05g01060 743 Gene3D Peptidase S8/S53 domain 134 605 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03404 Csa-Chr3:30713657 Csa05g01060 Csa-Chr5:10608689 2.02E-150 dispersed
Csa05g01060 Csa-Chr5:10608689 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa06g02669 Csa-Chr6:23476720 Csa05g01060 Csa-Chr5:10608689 7.60E-157 dispersed
Csa05g01055 Csa-Chr5:10517396 Csa05g01060 Csa-Chr5:10608689 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01060 - - csv:101206801 1421.37