Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g01091 | ATGGCATCAGGGGTGTTGGTTTTGGTCTTCGCTTGCTTCCTCATATCATTCCCTCAAAATTCTTCTCAATCTACTACAGATCCTCATCAAGAGCAAACTCTGAACTCCATGTTTAGACAATGGAATATATTCGCGCCTAACAATACAAAGAAAAACGGGGTAAGATTTCGGAGTTGGAATATTAGCGGCAACCTCTGCACTGGGATTGCTAAGGATAACAGCAACATCGAAGATTCAACAGAAAGTCCTTTGATCAAATGTGATTGCTCCTACAACAATAAATCTACTTGCCACATAACCCATCTGAAGGTTTCAGGATTGGATATTGCTGGTGTAATCCCTCCCGAGCTATGGACACTGACTTCCCTCACCTATTTGAATTTGGAGAAAAATTTATTGTCAGGGACACTGTCGCCTTCTGTTGGTAATCTAACGCAATTGCATACCTTGCGCATTCAAATCAATAAATTATCAGGAAAACTTCCAAAGGAACTCGGACATCTTGCCAACCTAAGATTCTTGGCCTTTGGGGTCAACAATTTCTCTGGTACCTTGCCATCAGAGCTTGGACATCTTTTTGGGCTAGAGGAACTGTACTTAGATAGTTCTGGAGTTCAGGGTGACATTCCCACAACATTTTCAAATCTTACAAATTTGCAGACAGTATTGGCATCAGACAACAAACTCACCGGAGAAATACCTGGATTCATTGGGAGTTGGCTAAAACTCAGAACATTGATGTTTCAAGGAAACTCTTTCACGGGACCAATACCGTCAACATTTTCAAATTTGACAGCTATGAATGATTTGAGAATAGGTGATCTATCAAATGGGGGGTCTTCCCTAGAATTCATCAAGAATATGACGTCTCTGCGGACCCTAGTTTTGAGGAATAATGGTATATCAGATTTAATTCCTTCCTACATTGGAGAGTTTGAAGAATTGACGTGGCTAGACTTGAGTTTTAACAAGTTAAAGGGAGAAATTCCAGAGTGGCTTTTCAACTTGACTAAGCTGTCATACTTGTTTCTTGGAAACAACAAGTTAACGGGTAGACTACCTCAAACTAAGTCTGACACTCTTCTTGTTATAGACTTATCATACAATGGTTTATCAGGGACCATTCCTGAATGGGTCGATGGTTCAACCTTACAGTTAAATTTAGTTGCCAACAACTTCCTCTCAGAACATGTGAAAGAGAGTAATTTACCTTTGGGTTTGCACTGTCTTCAACGAGAATTTTCTTGTAATGGAACTTCTGGAGGTTCTAGTTTGAAACCTAGTTTTGGGATCAACTGTGGAGGTTCAAAATTTGATGAGTATGATAAACAAAGTGCGATTACTGGTGGAGCTTCATATTATGTTAGTGACTCAGAAACTTGGGCTGTTAGTGATGTTGGAAACTTCCCTAATACCGAAAACTCTACTAGTTATAACAGAGGCAATAGAAACTCTACTAGTTATAACAGAGACAGTGACACAACAGAATATACATTTGCAAATAGAAACGTCTCAGAACTTTTTTGGACACAAGAATTATCTACTTCATCATTGAGATTTTACGGACTGGGACTTAAAAACGGGATCTACACTGTGAACCTTCTGTTTGTAGAACAAGCTTTCACAAATTTGTCGAAATGGAGCAGCCTTGGGAGGCGGGTCTTTGATATATATATTCAGGGGGAACTTTTCCAGGAGGATTTTAGTATTCAAAATGAGGCAGGTGGGTCTTTTCGTCCTATTTCAAAGCCATTTAAGGTACCAGTTTCAAAAAACTACATGGAAATTCACCTTTTCTGGGCTGGGAAAGGTACTTGCTGCATACCTAAAGACGGTACTTTTGGTCCTTCTGTTTCAGCAATCTTTGCAAGTCTAGATTCTGATCAGCCTGTAAGTAATGCGAAGAAGGGAACTAGTCAAATAAAGGGGACCGGTAGTAAGAAGAATGCAGCCATTCTAATAGTGGGGATTGTTGTTGGTGTAGGATCTGTTTGCTTTCTAGTTTTCACAATTTCCATTCTTTTCTATAGAAGGAAAGGTCGTTCCTCTGAAGATGAAGAACTCTTCGGAATTGATGATCAGAGACCTCACACTTATAGTTATTCTGAACTAAGGACTGCTACAGAGGATTTTAGTTCATCCAACAAGCTTGGAGAAGGGGGCTTTGGACCCGTTTACAAGGGAATACTGAATGATGGAAGAGTAATTGCTGTGAAGCAACTTTCTGTAAAATCTAATCAAGGAAGGAACCAATTTGTGGCTGAGATTTCTACATTATCCGCCGTGCAGCATCGCAACCTCGTGAAGTTGCACGGGTGTTGCATTGAGGGCCAAAATCGTCTCCTTGTGTATGAGTACCTGGAGAAAGGGAGTCTGGACCGAGCATTATTTGGAAATAGAAGCTTCACTCTTGATTGGCCAAAACGATTTGATATATGCTTGGGTGTGGCGAGGGGTCTCTCTTATCTTCATGAAGAATCAAGGCTTCGAATTGTTCATAGAGATGTTAAAGCCAGTAACATTCTACTTGATGCTGATCTGAACCCCAAAATTTCAGATTTTGGTTTAGCCAAACTTTATGATGACAAAAAGACTCATATTAGCACCGTTGTTGCTGGAACAATTGGATATCTTGCACCTGAGTACGCCATGCGTGGCCATCTAACGGAGAAAGCTGATATCTTTAGTTTCGGTGTCGTGGCTCTTGAAATTGTCAGCGGTAGGCCGAATTCCGACAGAAGCTTGGAGGAGGACAAAGTTTTTCTTCTTGAACTGGCTTGGTACCTCTATGAAAACAATCGTGAAATCGAGTTGCTAGATTCGGATTTGTCGACATTCAATGAGGATGAAGTAACACGAGTTATTCGAGTAGGTCTAATGTGCACTCAAACAACCCCAGCTCGACGGCCATTGATGTCACGGGTTGTGGCAATGTTGTGTGGAGACATTGAAGTGGCTGCTATAACTTCAAAGCCAGGATACTTAAGTGAATGGACCTTCGATGACTTGGTCACTTCTACAAATGATGCAACTACAGAAGGATCCAGCACTACCCATCAAGGTTCTTCAAGTTTTAGCATCCATGCTAACGATGCAACCTCTTCAAATTAA | 3111 | 40.79 | MASGVLVLVFACFLISFPQNSSQSTTDPHQEQTLNSMFRQWNIFAPNNTKKNGVRFRSWNISGNLCTGIAKDNSNIEDSTESPLIKCDCSYNNKSTCHITHLKVSGLDIAGVIPPELWTLTSLTYLNLEKNLLSGTLSPSVGNLTQLHTLRIQINKLSGKLPKELGHLANLRFLAFGVNNFSGTLPSELGHLFGLEELYLDSSGVQGDIPTTFSNLTNLQTVLASDNKLTGEIPGFIGSWLKLRTLMFQGNSFTGPIPSTFSNLTAMNDLRIGDLSNGGSSLEFIKNMTSLRTLVLRNNGISDLIPSYIGEFEELTWLDLSFNKLKGEIPEWLFNLTKLSYLFLGNNKLTGRLPQTKSDTLLVIDLSYNGLSGTIPEWVDGSTLQLNLVANNFLSEHVKESNLPLGLHCLQREFSCNGTSGGSSLKPSFGINCGGSKFDEYDKQSAITGGASYYVSDSETWAVSDVGNFPNTENSTSYNRGNRNSTSYNRDSDTTEYTFANRNVSELFWTQELSTSSLRFYGLGLKNGIYTVNLLFVEQAFTNLSKWSSLGRRVFDIYIQGELFQEDFSIQNEAGGSFRPISKPFKVPVSKNYMEIHLFWAGKGTCCIPKDGTFGPSVSAIFASLDSDQPVSNAKKGTSQIKGTGSKKNAAILIVGIVVGVGSVCFLVFTISILFYRRKGRSSEDEELFGIDDQRPHTYSYSELRTATEDFSSSNKLGEGGFGPVYKGILNDGRVIAVKQLSVKSNQGRNQFVAEISTLSAVQHRNLVKLHGCCIEGQNRLLVYEYLEKGSLDRALFGNRSFTLDWPKRFDICLGVARGLSYLHEESRLRIVHRDVKASNILLDADLNPKISDFGLAKLYDDKKTHISTVVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALEIVSGRPNSDRSLEEDKVFLLELAWYLYENNREIELLDSDLSTFNEDEVTRVIRVGLMCTQTTPARRPLMSRVVAMLCGDIEVAAITSKPGYLSEWTFDDLVTSTNDATTEGSSTTHQGSSSFSIHANDATSSN* | 1037 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11066223 | 11130380 | - | CsaV3_5G014150.1 | Csa05g01091 | 529478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g01091 | 1036 | Pfam | Leucine rich repeat | 290 | 349 | IPR001611 | GO:0005515 | |
Csa05g01091 | 1036 | Pfam | Protein kinase domain | 712 | 916 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa05g01091 | 1036 | CDD | STKc_IRAK | 717 | 981 | - | - | |
Csa05g01091 | 1036 | Gene3D | - | 428 | 624 | - | - | |
Csa05g01091 | 1036 | SUPERFAMILY | L domain-like | 94 | 377 | - | - | |
Csa05g01091 | 1036 | Gene3D | Ribonuclease Inhibitor | 278 | 421 | IPR032675 | - | |
Csa05g01091 | 1036 | ProSiteProfiles | Protein kinase domain profile. | 711 | 985 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa05g01091 | 1036 | Gene3D | Transferase(Phosphotransferase) domain 1 | 787 | 989 | - | - | |
Csa05g01091 | 1036 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 831 | 843 | IPR008271 | GO:0004672|GO:0006468 | |
Csa05g01091 | 1036 | Pfam | Malectin domain | 431 | 621 | IPR021720 | - | |
Csa05g01091 | 1036 | SUPERFAMILY | Protein kinase-like (PK-like) | 694 | 979 | IPR011009 | - | |
Csa05g01091 | 1036 | SMART | serkin_6 | 711 | 979 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa05g01091 | 1036 | Gene3D | Ribonuclease Inhibitor | 46 | 277 | IPR032675 | - | |
Csa05g01091 | 1036 | MobiDBLite | consensus disorder prediction | 472 | 492 | - | - | |
Csa05g01091 | 1036 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 134 | 1025 | - | - | |
Csa05g01091 | 1036 | MobiDBLite | consensus disorder prediction | 1009 | 1036 | - | - | |
Csa05g01091 | 1036 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 134 | 1025 | - | - | |
Csa05g01091 | 1036 | Gene3D | Phosphorylase Kinase; domain 1 | 675 | 786 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g00800 | Csa-Chr4:5599656 | Csa05g01091 | Csa-Chr5:11066223 | 1.72E-112 | dispersed | |
Csa05g01091 | Csa-Chr5:11066223 | Csa07g01190 | Csa-Chr7:11679101 | 0 | dispersed | |
Csa05g01091 | Csa-Chr5:11066223 | Csa04g02258 | Csa-Chr4:23201564 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
78236 | PF00069 | Pkinase | 1.00E-46 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g01091 | - | - | csv:101214104 | 2055.8 |