Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01191 ATGGAAGTTGTGGTTTTGAGGTATTCTTCATTGTTCTTCGTCTTGTTGGTTTGTGTACTGCATTTGGTTCGAGCTGGAGATGCAGAAGCTCTGTTAGCATTGAAAGAATCTCTTCACACTGGGAACTCGCTTCCATGGCGAGGAAGGTCTTTCTGCCACTGGCAAGGAGTTAAAGAATGCGCAAATGGGCGGCTTCGTGTTCTCAGTTTCAAAGGAAATTCGCTTTCCGGTCCAATCCCTGATCTCTCGGGTCTAGTTAATCTAAAATCCCTCTATCTAAGCGACAACAACTTTTCCGGCGAGTTTCCGAGCTCCATCTCTAATCTCCACCGCTTGAAGGTCGTCGTTCTTTCCGGTAACAAAATATCTGGTCCCATTCCAGAAACATTACTTAAACTCCGGCGTCTCTATGTTCTACACTTGCAAGACAACCAACTTACCGGCTCCATTCCTCCTTTCAACCAAACCAGTCTGCGATTCTTCAATGTCTCTAACAACCACCTCTCCGGCGACATCCCAGTAACCCCCACCTTAGCCCGATTCAATGTCTCGTCATTTTCCGGCAACCTAGAGCTTTGCGGAGAACAAGTTCAAAACCCTTGCGGAAATATTTCCATTGCGCCATCATTAAGTCCCTCTTTTCCACTAATCCCTAGCTCAAGCTCGTCTTCAAGACGACACAAATTGGTCAAGATAATAGCTGGAAGTGTTGGTGGGTTTGTTGGGTTGTTATTAATTATTCTTTTACTGTGTATGATTTGCAAATGTAGGGAAAGAAAAAGCCTATCGGAGGTTAGAAACAAAGGAATTGGAGAGGAGGGGGTGGAGGAAACACCTGGAACTGCCGGCGGCGGCGGCGGCGGCGGTGGCGGAGGTAATAACGGGGGAAAACAAGGGGGCTTTTCTTGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACTTATAGTTTGGAAGATTTGTTGAAAGCTTCGGCGGAGACTTTGGGCAGAGGGACCATTGGAAGCACATACAAAGCAGTAATGGAATCTGGGTATATTGTGACAGTGAAGAGGCTGAAGGATTCAAGGTACCCACGAGCAGAGGAATTCGGACGGCAGATGGAGGTTCTTGGGCGGCTCAGACACCCTAATTTGGTCCCTCTTAGGGCATATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTATTTCCCCAATGGCAGTCTCTTCTCTCTCATCCATGGATCAAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCTTGCCTAAAAATAGCGGAAGACTTAGCCAATGGTTTGCTCTACATCCACCAGAACCCAGGCTCAACACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCTGATTTCGAATCCTGTCTTACTGATTACGGTCTTAACTTATTCCGAGATCCTGACTCGCTTGATGAACCCAGTGCAACCTCACTCTTTTACCGAGCTCCCGAATGCCGCGACATACGTAAGCCAACCACCCAACAAGCAGATGTCTATAGTTTTGGTGTTCTTCTATTGGAGCTTCTTACAGGAAAAACACCATTCCAAGATCTTGTTCAAGAACACGGTTCCGACATTCCCAAGTGGGTTAGTTCAGTTAGAGAAGAGGAGACAGAGTCCGGGGATGATCCCACATCTGGGAATGAGGCGTCAGAAGAGAAACTTCAAGCTCTTTTGAACATAGCAATGGCTTGTGTTTCGCTTATGCCGCAAAACCGACCAACAATGAGGGAAGTACTAAAGATGATAAGAGATACAAGAGCTGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGGAGATGGTCTGATATTGTGCAGAGTTTGCCAAGGGAAGAACATTTAAGCATTTGA 1908 46.59 MEVVVLRYSSLFFVLLVCVLHLVRAGDAEALLALKESLHTGNSLPWRGRSFCHWQGVKECANGRLRVLSFKGNSLSGPIPDLSGLVNLKSLYLSDNNFSGEFPSSISNLHRLKVVVLSGNKISGPIPETLLKLRRLYVLHLQDNQLTGSIPPFNQTSLRFFNVSNNHLSGDIPVTPTLARFNVSSFSGNLELCGEQVQNPCGNISIAPSLSPSFPLIPSSSSSSRRHKLVKIIAGSVGGFVGLLLIILLLCMICKCRERKSLSEVRNKGIGEEGVEETPGTAGGGGGGGGGGNNGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDSRYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGSTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLDEPSATSLFYRAPECRDIRKPTTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPTSGNEASEEKLQALLNIAMACVSLMPQNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI* 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12337268 12343923 - CsaV3_5G015150.1 Csa05g01191 529578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01191 635 Gene3D Phosphorylase Kinase; domain 1 313 405 - -
Csa05g01191 635 MobiDBLite consensus disorder prediction 545 566 - -
Csa05g01191 635 Pfam Protein kinase domain 333 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g01191 635 MobiDBLite consensus disorder prediction 606 635 - -
Csa05g01191 635 SUPERFAMILY Protein kinase-like (PK-like) 334 608 IPR011009 -
Csa05g01191 635 MobiDBLite consensus disorder prediction 606 620 - -
Csa05g01191 635 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 65 - -
Csa05g01191 635 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 65 625 - -
Csa05g01191 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 65 - -
Csa05g01191 635 Gene3D Ribonuclease Inhibitor 25 203 IPR032675 -
Csa05g01191 635 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Csa05g01191 635 SUPERFAMILY L domain-like 27 179 - -
Csa05g01191 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 65 625 - -
Csa05g01191 635 Pfam Leucine rich repeat N-terminal domain 26 57 IPR013210 -
Csa05g01191 635 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g01191 635 Gene3D Transferase(Phosphotransferase) domain 1 406 621 - -
Csa05g01191 635 MobiDBLite consensus disorder prediction 273 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa05g02631 Csa05g01191 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01191 Csa-Chr5:12337268 Csa06g02957 Csa-Chr6:25603384 8.59E-147 dispersed
Csa05g01191 Csa-Chr5:12337268 Csa02g00154 Csa-Chr2:1087160 5.28E-110 transposed
Csa05g01191 Csa-Chr5:12337268 Csa01g02093 Csa-Chr1:18117705 8.84E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78240 PF00069 Pkinase 5.00E-36 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01191 - - csv:101209119 1127.85