Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01229 ATGTGGCAAACCATTGCTATAGCATTTCAAACACTTGGTGTTGTATATGGTGACATGGGTACAAGTCCATTATACGTTTTTGCTGATGTATTCACCAAGGTGCATATTGAGGAAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTTGTTGTGCTAAGAGCCAATGACAATGGTGAAGGAGGGACATTCGCATTGTATTCGCTTATCTGTAGATATGCCAAAGTTAACTTGCTGCCAAACCGTCAGCCAGCTGATGAACATATCTCAAGTTTTAAGCTTAAACTACCCACTCCAGAGTTGGAAAGGGCCTTGAATATTAAAGAGATTCTGGAGAAAAGATCATCCTTGAAAACTCTTATACTGCTGTTGGTTCTGATGGGGACTTCAATGGTTATTGGGGATGGTATTCTGACTCCGGCAATATCAGTGATGTCGGCTGTGAGTGGTTTGCAGGGACAAATAAAGTCTTTCGATACAAATGCTGTGGTTATTGTTTCAATCATCATCCTTGTGGCCTTGTTCAGCATTCAGAAATTTGGAACTGGGAAAGTAGGATTTTTATTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGTCTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCTCACCGTTGTAAGGGCTCTCAATCCCACTTATATTTATTTATTCTTCAAGAAAAATTCAAATAATGCATGGTCAGCACTTGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTCGCTGATCTAGGTCATTTCACTGTGCCGGCCATACAGATTGCCTTCACATTTGTTGTTTTCCCCTGCCTTCTCTTGGCATACATGGGCCAGGCTGCGTACCTTATGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGCCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCAAGCCAAGCAATGATATCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGCTTTCCGAGAATGAAGATAGTTCATACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATTAATTGGTTTCTGATGATTATGTGCATATTTGTCGTCGCAATATTTCAAAGGACTACAGACATTGCCAATGCTTATGGTATTGCAGAAGTTGGTGTGATGCTGGTGAGCACTGTCCTTGTGACTCTAGTAATGCTTCTAATCTGGCAGACAAATTTGTTTCTTGCGTTGTGTTTCCCACTTGTGTTTGGGTCGGTGGAATTTATCTACTTAACTGCAGTTCTATCAAAAATCAGAGAGGGTGGTTGGTTGCCACTTGCTTTTGCTTCTGTCTTCCTCTCTGTGATGTACACGTGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGACAAGATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGTACTGTAAGAATTCCAGGAATTGGGCTTCTCTACAATGATCTTGTCCAAGGCATTCCAGCAATTTTTGGGCAGTTTCTTCTTACCCTTCCTGCCATCCACTCCACCATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCGCAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATTGCGAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCAAGCGTTTGAGCAACTTCTGATGGAAAGCCTTGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTTGAGAGCAATTTGAATGAGTTAGAATTGGATAATATTTCAGAGAGGTCGCAGGGTTTTTCATCTCCACGTGTTGCTGATGTTAACGAGGAACTGAGAATTCCATTGATAGAACAAGAAAGAACTGTGGGTCCAGAGGAAGCTTTTGGGGTTCAGTTGCCATCCAGCGTTATGGCATCAGATGATGATCCTAGTTTGGAGTATGAGCTATCAGCGCTTCGGGAAGCCATGGATTCAGGGTTTACGTATCTAATGGCGCAAGGAGATGTCCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTATTATAAACTATTTCTATGCATTCCTAAGGAGGAATTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCTCACATGAACATCATGCAAGTTGGTATGACTTACATGGTTTGA 2247 41.74 MWQTIAIAFQTLGVVYGDMGTSPLYVFADVFTKVHIEEDVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNLLPNRQPADEHISSFKLKLPTPELERALNIKEILEKRSSLKTLILLLVLMGTSMVIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFLFAPVLALWFFSLGSIGIYNVVKYDLTVVRALNPTYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTFVVFPCLLLAYMGQAAYLMKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFQRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLALCFPLVFGSVEFIYLTAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRIPGIGLLYNDLVQGIPAIFGQFLLTLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHQAFEQLLMESLEKFLRKESQDLALESNLNELELDNISERSQGFSSPRVADVNEELRIPLIEQERTVGPEEAFGVQLPSSVMASDDDPSLEYELSALREAMDSGFTYLMAQGDVRAKKNSFFVKKLIINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV* 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12915450 12926425 - CsaV3_5G015530.1 Csa05g01229 529616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01229 748 Pfam K+ potassium transporter 8 581 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa05g01229 748 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 748 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa05g01229 748 TIGRFAM kup: potassium uptake protein 7 748 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa05g01229 748 PANTHER POTASSIUM TRANSPORTER 12-RELATED 1 748 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa05g02054 Csa05g01229 CCT
Csa05g02054 Csa05g01229 ECH
Csa05g01229 Csa05g02054 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00943 Csa-Chr4:7044794 Csa05g01229 Csa-Chr5:12915450 0 dispersed
Csa05g01229 Csa-Chr5:12915450 Csa05g02908 Csa-Chr5:29584874 0 dispersed
Csa07g01811 Csa-Chr7:18358598 Csa05g01229 Csa-Chr5:12915450 0 dispersed
Csa07g01813 Csa-Chr7:18374740 Csa05g01229 Csa-Chr5:12915450 0 dispersed
Csa05g01229 Csa-Chr5:12915450 Csa03g03914 Csa-Chr3:34316948 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01229 K03549 - csv:101202804 1423.3