Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g01302 | ATGGCGGGAGTAGAATTGCTGGATATGTTTCCTCATCGGGACCTTGAAGAGGGAGCCACTGCCTCTTCTGATTGGAATCCAACTGATGCTGTGCTGTTTTTTGGACTGAGTTTGGTACTTGGAATTGCTTGCAGACACCTATTGCGAGGCACTAGAGTTCCTTATACAGTTGCCTTGCTTGTTCTTGGCATAGTTCTTGGATCTATTGAATATGGCACACATCATCAATTGGGAAAGATAGGGGATGGCATACGTCTCTGGGCAAAAATTGATCCTGATTTATTACTGGCTGTTTTCCTCCCTGCTTTGCTGTTCGAGAGTTCCTTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTGGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTAGGATCTGCTTTCAAGCTCACTTTCCCGTATAATTGGAGTTGGAAAACATCATTGTTGCTCGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTGGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACAATAATAGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGTGCTATAATCAAATATCTCACACAAGTCTCGCTGGGAGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACAGTGATAGAGATTGCATTAACACTAGCTGTGAGCTATATTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTTTCGGGTGTTCTGACAGTGATGAGTTTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGTGACGGTCAACAAAGCTTGCATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACATTAATTTTCATATTGAGTGGAGTTGTTATCGCTGAAGGTGTTCTTGGAAGCGAAGGAATTCTTGATAATGGAGCTTCATGGGGCTACCTCATTATACTTTATGTGTACGTGCAAGCTTCTCGATTTATGGTTGTTGGAGTATTATATCCATTTCTGCGGTATTTTGGGTATGGCTTGGATTGGAAAGAAGCTACAATACTAATATGGTCAGGTCTGCGTGGAGCTGTTGCTCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCAATCATTGTACATCAGTTCAGAAACTGGAACACTGTTTGTTTTTTTCACGGGTGGAATTGTATTCTTGACGCTGATTGTAAATGGTTCGACCACACAATTCATTTTACATCTTCTCAACATGGACAAGCTCTCAGTGGCTAAGAAACGCATATTGGATTATACAAAATACGAGATGATGAACAAAGCATTGGGCGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGGCTACAGTTAAAAGACATATTACAAGTCTCAGTCATGTGGAGGGGGAGCCACTGCACCCGCACAATGCATTTGAAAGTGATCAAAATGTTCGATCTATGAATTTGAGAGACATTCGTCTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCCAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCAGATTGCATATGAGCCCCTTTGTGATTGGAAGGGTTTAAAGTCTAATGTCCATTTTCCAAACTATTACAAGTTCCTTCAGACAAGCGTTTTCCCTCAGAAGTTGGTTACATATTTCACTGTGGAAAGATTAGAGTCCGGGTGTTACATTTGTGCTGCATTTCTCCGTGCACATCGAATTGCAAGACAGCAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTAATTAATGAAAGTGAAGCTGAGGGTGAAGAAGCACGAAAGTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTCAAAACCAGACAAGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCCTGTTAGAAGAGAAAGAGATGTTGCATCTTCATGATGCTGTTCAGACCGACTTGAAAAGGCTTCTACGAAATCCTCCTTTGTTAAAGATTCCAAAAATGCGGAACTTAATCAGTGCCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGTGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTAACACTTTACAAGGAAGGTTCAAAGCCTAGTGGTGTTTGGCTTATATCCAACGGAGTGGTAAAGTGGATAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGCACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCTTCTGTGACATGATTACAGATTCCGTTGTTCTCTCTTTTTTTATTGAACATGACAAGTTTCTTTCAATACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTTTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATCTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGCATATAGCAGGAGAAACAATAGAAATTCCACCCCATTCTATTGGCCTTTTGTTGGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTTATAGCATCACCTGCTGTATTGTTCTCCTCGCACAGGAATCCGAGCTTCCAAAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCAAGGCTCCCATTATGAAGTTGAAACAAGATCAAGAGTGATCGTTTTTGACATGGGTGCCCTTCAATCAGAAGAAAATCTAAATCGGTCGTCGTCTTTTATTCATTCTGTTGATCACCCTCAAAGATCTCTAAGCAGAGATCACTCAGGTCTTATGAGTTGGCCTGAAATGCTTTCTAAGCCTAGACCACCACAGAAGCAGAAATCTGAAAGAATTGAGCGTCCAGCTGATAGCTTGTCTGCAAAGGCCATGCAACTAAGCATATACGGTAGCATGGTTGATTTTCGTCAGCGGACTAAGAGTTTTCCGGGCAATATTGCGGAACCATCTCATAGCCGGTCGAATCCTGCAATTGGTTCACATAAAGGTGTTTCCCTTCCATACGTAAAATCAGAAGGAGCTGCTACATTGAAGAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCAATGTTAGACCCCCACAACAAAAAGCACTTCCTAATGAGAGAAATGTAAGGGATGATTCAAGTGAGGAATCGGGTGGTGAGGACGATGTGATAGTGAGAATTGATTCACCAAGTGTGCTTTCGTTTCACCAGGTACCATGA | 3435 | 41.69 | MAGVELLDMFPHRDLEEGATASSDWNPTDAVLFFGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHQLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLTVMSLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSEGILDNGASWGYLIILYVYVQASRFMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDQSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLNMDKLSVAKKRILDYTKYEMMNKALGAFGDLGDDEELGPADWATVKRHITSLSHVEGEPLHPHNAFESDQNVRSMNLRDIRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDQIAYEPLCDWKGLKSNVHFPNYYKFLQTSVFPQKLVTYFTVERLESGCYICAAFLRAHRIARQQLHEFIGDSDIASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLLKIPKMRNLISAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWISKSMRNKFSLHPTFTHGSTLGLYELLTGKPCFCDMITDSVVLSFFIEHDKFLSILRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHIAGETIEIPPHSIGLLLEGFIKSHGIQEELIASPAVLFSSHRNPSFQNMENSGMSGSSFSHQGSHYEVETRSRVIVFDMGALQSEENLNRSSSFIHSVDHPQRSLSRDHSGLMSWPEMLSKPRPPQKQKSERIERPADSLSAKAMQLSIYGSMVDFRQRTKSFPGNIAEPSHSRSNPAIGSHKGVSLPYVKSEGAATLKKRLDARKLPISNVRPPQQKALPNERNVRDDSSEESGGEDDVIVRIDSPSVLSFHQVP* | 1145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 13822662 | 13845207 | + | CsaV3_5G017250.1 | Csa05g01302 | 529689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g01302 | 1144 | CDD | CAP_ED | 737 | 846 | IPR000595 | - | |
Csa05g01302 | 1144 | SUPERFAMILY | cAMP-binding domain-like | 723 | 851 | IPR018490 | - | |
Csa05g01302 | 1144 | Pfam | Sodium/hydrogen exchanger family | 33 | 443 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Csa05g01302 | 1144 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 25 | 972 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Csa05g01302 | 1144 | Gene3D | Jelly Rolls | 701 | 863 | IPR014710 | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 987 | 1028 | - | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 1012 | 1026 | - | - | |
Csa05g01302 | 1144 | Gene3D | - | 151 | 203 | - | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 1050 | 1073 | - | - | |
Csa05g01302 | 1144 | PANTHER | - | 25 | 972 | - | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 1110 | 1128 | - | - | |
Csa05g01302 | 1144 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 737 | 840 | IPR000595 | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 1094 | 1131 | - | - | |
Csa05g01302 | 1144 | MobiDBLite | consensus disorder prediction | 1052 | 1068 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g01302 | Csa-Chr5:13822662 | Csa07g00987 | Csa-Chr7:8761829 | 1.91E-11 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g01302 | - | - | csv:101209966 | 2201.4 |