Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01396 ATGGCGAGCCGATACTGGATGGTCTCTTTACCTGTTCAAGGCTCCGCTTCCTCTCTATGGAATCGTCTTCAAGAACAAATCTCTAAGCACTCTTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTCCGTGTTGGAACGCTGGATTCGCTTCTTTCCCTCAGCGACGATCTTCTAAAGTCGAACACCTTTGTGGAAGGAGTTTCTCAGAAGATCAGACGGCAGATCGAGGAACTGGAGAAGGTTTCAGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTATCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGACATTGTAGATAGCATTCACAGCCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGTGTTGCTGAGTATAATAATGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAGCATCTAGCAACCCTTCTCGTGATTATTCCCAAGTACTCTCAGAAAGAGTGGCTCTCTAGCTATGAGACACTGACTAGCTATGTAGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAATGAATATGCCCTTTACACTGTAACACTCTTTAATCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAAGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGCTTTAGAAGTTCTTTATTGCAGTGGTCCTATGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTTTGTGCCGTACGTGTCTTTGCTGAGAGTATCCTGAGATATGGTTTACCACCATCGTTCCTGGCATCTGTTTTGGCGCCTTCTGTTAAAAGTGAAAAGAAAGTAAGATCAATCCTTGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGGGATGGCTGGTCTTGGAGGAGATTCTGATGCACACCCATATGTCTCATTCACAATCAATCTTGCTTAA 1131 43.5 MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNTFVEGVSQKIRRQIEELEKVSGVESNVLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHSQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLATLLVIIPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFKTSAREKGFQIREFEYSPEAQESRKQELEKLVQDQESFRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGGGMAGLGGDSDAHPYVSFTINLA* 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14894425 14900768 + CsaV3_5G020170.1 Csa05g01396 529783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01396 376 Gene3D - 41 312 - -
Csa05g01396 376 SUPERFAMILY Vacuolar ATP synthase subunit C 2 375 IPR036132 GO:0015078|GO:0033180|GO:1902600
Csa05g01396 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Csa05g01396 376 Gene3D - 163 251 - -
Csa05g01396 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180|GO:0046961|GO:1902600
Csa05g01396 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180|GO:0046961|GO:1902600
Csa05g01396 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 - -
Csa05g01396 376 Gene3D Vacuolar atp synthase subunit c; domain 1 5 334 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01396 K02148 - csv:101221574 725.317