Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01742 ATGAATTATCTCATCATCCCTTTCGTCCTTCTCTTCTCCTTCATCCCCATTTCATTCCAATCCAAAGTCTCCGTTTCTTTCTCCCCTTCCATTCTCTCCAAATCCGGCGATTCTGTTCATATTCAATGGTCTGGAATCGAATCCCCTTCCAAGCTCGACTGGCTCGGAATTTACTCTCCCCCAAATTCATCCCATAAGCATTTCATCGGCTACCTTTTCCTTTCTTCTTCTCCCACCTGGGAATCCGGGTATGGATCCGTTTCCATCCCTTTAGTCAACCTCCGATCCAATTACGCTTTCAGGATTTTCCGGTGGACGGAATCGGAGATCGATGACAAGCATCACGACCACGATCACAACCCTCTACCTGGCACCGCGCACCTCCTCGCGGCCTCAGATGAGCTCCGATTCGCCCCCGGCGGTGGCCCGGAGCAGATCCATCTGGCGTTCACTGACCAGGATGACGAAATGAGAGTGATGTTTGTGACGAAGGATGGATCGAAAAGGTATGTGAGATATGGGGAAAAGAAGGAGAAGCTTGATCAGATTGTTGTGGCGGGTGTTGAGAGGTATGAGAGGGAACACATGTGCGATTCCCCAGCTAATGATAGCATTGGCTGGAGAGATCCTGGTTTTATTCATGATGCTGTTATGAATAAATTGAAGAAAGGAGCTAAGGTTTATTATCAGGTTGGGAGTGATTCTAAAGGTTGGAGTAGTATTCTAAACTTCGTGTCACGTAATGAGGACTCGGATGAAACGATTGCTTTCCTTTTTGGTGATATGGGAGCTGCAACACCGTACACGACCTTTGTCCGAACACAGGATGAAAGCATATCTACTGTTAGGTGGATACTTCGCGACATTGAAGCACTTGGTGACAAACCTGCAATGGTCTCTCACATTGGAGATATCAGCTATGCAAGGGGTCACTCGTGGTTGTGGGACGTTTTCTTCAATCAGGTTGAACCTGTGGCATCTAAGGTTGCATACCATGTATGCATTGGCAATCATGAATATGATTGGCCTCTTCAGCCATGGAAACCCGAGTGGGCTAACGGGATATACGGGAAAGACGGGGGAGGGGAGTGTGGGGTGCCATATAGTTTGAAGTTCAACATGCCAGGAAACTCCACAGAACCTACTGAAAGCCACAGCTTGCCTACTCGAAACCTTTTCTACTCTTTTAACATGGGATCGGTGCATTTTGTGTACATATCAACAGAAACCAATTTCCTTCAAGGAAGTAGCCAGTATGAGTTCATTAAGCGTGATTTGGAGTCGGTTGATCGGAAGAAAACGCCATTCATAGTAGTGCAGGGGCACAGACCAATGTATACAACGAGCAACGAACTAAGAGATGCCCCATTGAGGGAGAAAATGCTGCACCATTTGGAACCATTGTTAGTAAAAAATAATGTGACATTAGCATTATGGGGTCATGTCCATAGGTATGAGAGGTTTTGTCCACTTAATAACTACACTTGTGGAAGTATGGGTTTAGATGGGGAAGACTGGGAGGCATTACCTGTCCATCTCGTAATCGGAATGGCTGGACAAGATTGGCAACCAATCTGGGAGCCAAGACCAAACCACCCAGATGACCCAATCTTCCCACAACCAAAACGGTCGATGTACCGTGGAGGCGAATTCGGGTACACCAGATTGGTTGCTACAAAAGAGAAACTTACAATCTCTTACGTTGGAAACCATGATGGAGAGGTGCATGATTCTGTCGAGATATTGGCTTCTGGACAAGTTCTAAATGGTGGAGTTGGTGCAAAATTCATCAACAGTAGTATTGCAAACTCGACGACAGGGAATGCGATGCTAGAATTCTCATTCTCGTGGTATGTGATGGGAGGAAGTATTTTGGTTCTTGGAGCCTTCATTGGATACATTATTGGATTTGTTTCACATGCAAGGAAGAATTCACTTTCAAGAAACAACTGGACTCCTGTGAAGACTGAAGAGTTGCAATGA 1983 45.89 MNYLIIPFVLLFSFIPISFQSKVSVSFSPSILSKSGDSVHIQWSGIESPSKLDWLGIYSPPNSSHKHFIGYLFLSSSPTWESGYGSVSIPLVNLRSNYAFRIFRWTESEIDDKHHDHDHNPLPGTAHLLAASDELRFAPGGGPEQIHLAFTDQDDEMRVMFVTKDGSKRYVRYGEKKEKLDQIVVAGVERYEREHMCDSPANDSIGWRDPGFIHDAVMNKLKKGAKVYYQVGSDSKGWSSILNFVSRNEDSDETIAFLFGDMGAATPYTTFVRTQDESISTVRWILRDIEALGDKPAMVSHIGDISYARGHSWLWDVFFNQVEPVASKVAYHVCIGNHEYDWPLQPWKPEWANGIYGKDGGGECGVPYSLKFNMPGNSTEPTESHSLPTRNLFYSFNMGSVHFVYISTETNFLQGSSQYEFIKRDLESVDRKKTPFIVVQGHRPMYTTSNELRDAPLREKMLHHLEPLLVKNNVTLALWGHVHRYERFCPLNNYTCGSMGLDGEDWEALPVHLVIGMAGQDWQPIWEPRPNHPDDPIFPQPKRSMYRGGEFGYTRLVATKEKLTISYVGNHDGEVHDSVEILASGQVLNGGVGAKFINSSIANSTTGNAMLEFSFSWYVMGGSILVLGAFIGYIIGFVSHARKNSLSRNNWTPVKTEELQ* 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20707088 20710096 - CsaV3_5G025610.1 Csa05g01742 530129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01742 660 Pfam Purple acid Phosphatase, N-terminal domain 143 244 IPR015914 GO:0003993|GO:0046872
Csa05g01742 660 Pfam Calcineurin-like phosphoesterase 259 485 IPR004843 GO:0016787
Csa05g01742 660 SUPERFAMILY Metallo-dependent phosphatases 258 577 IPR029052 -
Csa05g01742 660 PANTHER PURPLE ACID PHOSPHATASE-RELATED 8 630 - -
Csa05g01742 660 Pfam Iron/zinc purple acid phosphatase-like protein C 510 578 IPR025733 -
Csa05g01742 660 PANTHER PURPLE ACID PHOSPHATASE 8 630 - -
Csa05g01742 660 Gene3D - 252 588 IPR029052 -
Csa05g01742 660 Gene3D - 142 249 - -
Csa05g01742 660 CDD MPP_PAPs 250 581 IPR041792 -
Csa05g01742 660 SUPERFAMILY Purple acid phosphatase, N-terminal domain 131 246 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01742 Csa-Chr5:20707088 Csa06g02082 Csa-Chr6:18596668 2.44E-57 dispersed
Csa05g01742 Csa-Chr5:20707088 Csa02g02096 Csa-Chr2:19060289 1.95E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01742 K22390 - csv:101209207 1379.0