Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01744 ATGTACAGGACAGTGGCTACATCTGCGGCCACAACTACCACAACAGATAGCCTGGATTATGTTGTAAATTTGGATCAAATTCCACGTTGGAGTGATGCAGAACATAGGTCTTCATTGGAGTTCGTTAACGAAGATCCTTCCTTCTCTAATTCTTACTTTCCTGATCCCCTCACGTCTCCATCTGACGCCGAAGGTGGGACCAATGGAGTCGTTTCGAGATTTCCCGTAGATCATGAAATTAATTCTAAAATATATCTCTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGAACTTGGATGAAGCGCACAGCAGCCCTGGTTTGCATGCTGCTGCAGGACCTGGTCTATTGGATGAATGTGGAACACTTGGTGGTTGCCGCACAGGAATGGCAAAAGTCACTAATGCTTATGACCTTCCAGCAAGAAAGGTCATACATACTGTTGGTCCAAAATATGCTGTCAAATACCATACTGCTGCAGAGAATGCTCTGAGCCATTGCTACCGTTCTTGCCTTGAACTTCTCATTGAAAATGGGCTTCAGAGCATTGCTATGGGTTGTATATATACAGAGGCAAAAAACTATCCCCGTGAACCTGCTGCACACGTAGCAATAAGAACTGTGCGCCGTTTTCTCGAGAAGCAGAGAGATAAAATTAAAGCGGTTGTATTTTGTACAACATCATCAGTAGATACAGAAATATACAAGAGGTTGCTTCCTCTGTACTTTCCTCGTGATAAACACGAGGAAGAAGTTGCATTATCAAAGCTTCCTGCAGATGTTGGAGATGAGAATGGGGAGACCATTATAGACGAGCGGAAAATAAGGATAAAATCTTTACCCAAAAAGAATGTTCCAAAGCCTCCCCAAGTTCTTAATGATACTCCTGTTAGTGATGTAAGGTTGACACGGAGGAACTCATCATATTTGGATTCATACTTGGATCCTGCTTTCATGGCTTTAATCAAAGACCCCGATCAAAGACGCAAGGAACAATGGGAAAAAACTGCCCAGGCGCAGACTGGATGGAACTATGGTAGAATACTTGGATTTGGTGACCTTGGGGGACCTCCTTTATCTGCTGCCGAAGAATATTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTTAATCTCTCTGAAATTGCGGAGATGAAAATAGTTTACCGTGGTGGAGTTGATAGTGAGGGTCGCCCTGTTATGGTTGTTGTGGGAGCACATTTTCTACTGCGTTGTCTTGATCTTGAGCGATTTGTACTCTACGTTGTAAAGGAGTTTGAGCCATTAATACAGAAGCCCTATACAATAGTGTACTTCCACTCAGCAGCTTCTTTGCAGCCTCGGCCAGACATGGGATGGATGAAGAGATTGCAGCAGATTCTTGGCCGAAAACACCAGCGTAACCTCCATGCAATATATGTTCTTCACCCAACCTTTGGATTGAAAGCTGCAGTATTGGCCATGCAATTGCTCGTGGATAATGTGGTATGGAACAAAGTTGTATACATTGATCGGCTACTGCAGCTATTCAAATACGTTCCTCGTGAGCAGTTGACCATCCCCGACTTTGTATTTCAGCACGACTTAGAAGTAAATGGAGGGAAGGGCTTGATTGTAGATCCTCGAACAAAATACGTATACCATCGGCCTTAG 1680 43.75 MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSPSDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLLDECGTLGGCRTGMAKVTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQRDKIKAVVFCTTSSVDTEIYKRLLPLYFPRDKHEEEVALSKLPADVGDENGETIIDERKIRIKSLPKKNVPKPPQVLNDTPVSDVRLTRRNSSYLDSYLDPAFMALIKDPDQRRKEQWEKTAQAQTGWNYGRILGFGDLGGPPLSAAEEYSLHSRYLAKANSLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDMGWMKRLQQILGRKHQRNLHAIYVLHPTFGLKAAVLAMQLLVDNVVWNKVVYIDRLLQLFKYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP* 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20726416 20740934 + CsaV3_5G025630.1 Csa05g01744 530131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01744 559 SUPERFAMILY CRAL/TRIO domain 388 527 IPR036865 -
Csa05g01744 559 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 539 - -
Csa05g01744 559 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 539 - -
Csa05g01744 559 Gene3D Leucine Aminopeptidase, subunit E, domain 1 14 256 IPR043472 -
Csa05g01744 559 CDD Macro_GDAP2-like 82 250 IPR035793 -
Csa05g01744 559 Gene3D - 389 540 IPR036865 -
Csa05g01744 559 ProSiteProfiles Macro domain profile. 71 251 IPR002589 -
Csa05g01744 559 Pfam Macro domain 100 212 IPR002589 -
Csa05g01744 559 SMART YBR022w_8 83 212 IPR002589 -
Csa05g01744 559 Pfam Divergent CRAL/TRIO domain 406 537 IPR001251 -
Csa05g01744 559 SUPERFAMILY Macro domain-like 73 280 IPR043472 -
Csa05g01744 559 SMART sec14_4 390 536 IPR001251 -
Csa05g01744 559 CDD SEC14 394 530 IPR001251 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00891 Csa-Chr5:6895793 Csa05g01744 Csa-Chr5:20726416 8.03E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01744 K24997 - csv:101209942 1123.61