Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g01826 ATGGCCGGTAAAGGAGAAGGTCCGGCTATCGGAATCGATCTTGGAACTACATACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATTGCCAACGACCAGGGTAACAGGACCACGCCGTCGTATGTTGCTTTCACCGACTCTGAGCGCTTGATCGGTGATGCAGCTAAGAATCAGGTCGCCATGAACCCGATTAATACCGTTTTTGATGCCAAGCGTTTAATTGGCCGAAGATTTAGCGATGCATCGGTCCAGAGTGATATCAAGCTCTGGCCGTTTAAAGTTATTGCTGGTCCTAGCGATAAGCCAATGATCGTTGTAAACTACAAGGGTGAGGAGAAGCAGTTCTCTGCTGAAGAAATCTCTTCTATGGTGCTCATAAAGATGAAGGAAATTGCTGAGGCGTATCTCGGCACAACAGTGAAGAATGCCGTCGTCACTGTCCCGGCTTACTTCAACGATTCTCAGAGACAGGCCACCAAGGATGCTGGTGTCATTTCCGGCCTAAATGTGATGCGTATTATCAATGAACCAACAGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGTCAAGCAGCTCTGGCGAAAAGAACGTTCTAATTTTCGATTTGGGTGGTGGTACATTTGATGTTTCATTGCTTACAATCGAAGAAGGTATTTTTGAGGTGAAGTCAACTGCCGGAGACACTCATCTGGGTGGTGAAGATTTTGACAACAGATTGGTTAACCATTTCGTGCAAGAATTCAAGAGAAAAAACAAGAAAGACATTAGTGGAAACCCCAGAGCTCTAAGAAGATTGAGAACCGCTTGTGAACGGGCGAAGAGGACACTTTCCTCCACAGCTCAAACTACAATTGAGATTGATTCTCTTTACGAAGGAATTGACTTCTATTCAACCATTACTCGTGCTAGATTTGAAGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGTTTGAGAGATGCCAAGATGGATAAAAGCACTGTACATGATGTTGTTCTTGTTGGTGGTTCTACTAGGATTCCTAAAGTGCAGCAATTGTTGCAAGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTTCAAGCTGCCATTTTGAGTGGTGAGGGTAATGAGAAGGTTCAAGATCTTCTGCTCTTGGATGTTACCCCTCTTTCCCTTGGTCTCGAAACAGCCGGTGGTGTGATGACTGTCTTGATTCCAAGGAATACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATATTCCGACAATCAGCCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGAGCAAGAACCCGCGACAACAACTTGCTTGGAAAATTCGAGCTCTCTGGAATCCCTCCGGCTCCAAGAGGTGTTCCTCAGATTACAGTTTGCTTCGACATCGACGCCAATGGTATTCTCAACGTCTCTGCCGAGGATAAAACCACTGGTCAGAAGAACAAGATCACAATCACGAATGACAAGGGGCGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCGGATGATGAGGAGCACAAGAAGAAGGTTGAAGCGAAGAACTCCTTGGAAAACTATGCTTATAACATGAGGAACACTGTGAGGGATGAGAAGTTCAGCTCCAAATTGGATCCGGCAGACAAAAAGAAGATTGAGGATGCCATTGAACAGGCAGTCCAGTGGCTTGACAACAACCAACTTGCTGAAGCTGATGAGTTCGAAGATAAAATGAAGGAGCTTGAGAGTATTTGCAACCCCATCGTTGCTAAGATGTATCAAGGTGCTGGAGGACCTGGCATGGGCGGCGGTGCTATGGATGACGATGATGCTCCTCCTCCATCCGGCGGCAGTGGCGCGGGTCCTAAGATTGAAGAAGTTGATTAA 1959 45.94 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGGAMDDDDAPPPSGGSGAGPKIEEVD* 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21611631 21615410 + CsaV3_5G026450.1 Csa05g01826 530213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g01826 652 Coils Coil 576 596 - -
Csa05g01826 652 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Csa05g01826 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Csa05g01826 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Csa05g01826 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Csa05g01826 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Csa05g01826 652 Gene3D - 10 384 - -
Csa05g01826 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Csa05g01826 652 Gene3D - 71 126 - -
Csa05g01826 652 Coils Coil 521 541 - -
Csa05g01826 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Csa05g01826 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Csa05g01826 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Csa05g01826 652 MobiDBLite consensus disorder prediction 618 652 - -
Csa05g01826 652 Gene3D - 192 366 - -
Csa05g01826 652 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 629 - -
Csa05g01826 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Csa05g01826 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Csa05g01826 652 PANTHER HEAT SHOCK PROTEIN 70KDA 1 629 IPR013126 GO:0005524|GO:0140662
Csa05g01826 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Csa05g01826 652 Gene3D - 545 619 IPR029048 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00701 Csa-Chr2:5673429 Csa05g01826 Csa-Chr5:21611631 0 dispersed
Csa04g01476 Csa-Chr4:14570618 Csa05g01826 Csa-Chr5:21611631 0 dispersed
Csa05g00196 Csa-Chr5:1166017 Csa05g01826 Csa-Chr5:21611631 0 dispersed
Csa05g01826 Csa-Chr5:21611631 Csa07g01387 Csa-Chr7:14011638 1.09E-178 dispersed
Csa05g01826 Csa-Chr5:21611631 Csa05g01833 Csa-Chr5:21670377 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g01826 K03283 - csv:101210925 1224.54