Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g01833 | ATGGCGGGAAAGGGAGAAGGTCCGGCCATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAACATGATCGTGTTGAGATTATTGCCAATGATCAAGGTAATCGGACCACGCCCTCTTATGTTGCTTTCACTGATACTGAACGTCTCATCGGTGATGCTGCCAAGAATCAAGTCGCTATGAATCCTCTCAACACCGTCTTTGATGCGAAGAGGTTGATTGGTAGGAGATTCTCCGATCCTTCGGTTCAGAGCGATATGAAATTATGGCCATTCAAGGTGATCCCCGGTCCAGGGGACAAGCCTATGATCGTCGTCAATTACAAAGGAGAAGAGAAGCAATTTGCAGCTGAGGAAATCTCCTCCATGGTCCTTACTAAAATGCGTGAGATTGCAGAAGCTTACCTTGGTTCCTCCGTGAAGAACGCCGTTGTCACCGTTCCTGCTTACTTCAATGACTCTCAACGTCAAGCCACCAAGGACGCTGGAGTCATCGCCGGTCTTAATGTTATGCGTATCATCAACGAGCCTACAGCTGCAGCCATTGCTTATGGACTCGACAAAAAGGCGACCAGCGTTGGCGAGAAGAATGTTCTGATTTTCGATCTGGGTGGAGGAACATTTGATGTCTCTCTCCTCACAATCGAGGAAGGAATTTTCGAGGTGAAGGCAACCGCCGGTGACACCCATCTCGGCGGTGAGGATTTCGACAACAGATTAGTTAACCATTTCGTTCAGGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCCCTCAGGAGATTGAGAACTGCTTGTGAAAGAGCCAAGAGAACCCTTTCATCTACTGCCCAAACAACAATCGAAATCGATTCTTTATACGAAGGAATCGATTTCTACACAACAATTACTCGTGCTAGATTCGAAGAACTCAACATGGATCTCTTCCGAAAGTGTATGGAGCCAGTTGAGAAATGTTTGAGAGATGCAAAGATGGACAAAAGCTCCGTCCATGATGTTGTTCTTGTAGGTGGATCTACAAGAATCCCAAAGGTACAACAGCTATTGCAAGATTTCTTCAATGGCAAGGAGCTTTGCAAGAGTATCAACCCTGATGAGGCAGTTGCTTATGGAGCTGCTGTTCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTTTTGGATGTTACTCCTCTATCCCTTGGTTTAGAAACTGCAGGAGGTGTAATGACGGTTTTGATTCCGAGGAACACGACGATCCCGACGAAGAAAGAGCAAGTTTTCTCTACCTACTCAGACAACCAACCTGGTGTTCTTATCCAAGTCTACGAGGGAGAAAGAACAAGAACAAAAGACAACAACTTGTTGGGTAAGTTTGAACTTTCAGGCATTCCTCCAGCTCCTAGAGGCGTTCCTCAAATCACTGTTTGCTTCGACATCGACGCAAACGGTATCCTTAACGTATCGGCCGAGGATAAAACCACCGGACAAAAGAACAAGATCACAATTACCAACGACAAAGGAAGGTTGTCGAAGGAAGAGATAGAGAAACTGGTTCAAGAAGCAGAGAAATTCAAGGCAGAGGACGAAGAACACAAGAAGAAAGTTGAATCCAAGAATGCTTTGGAAAACTATGCTTACAATATGAGGAACACAATCAGAGATGAAAAGATTGGCGGTAAGCTTGCTCCGGCTGATAAGAAGAAGATTGAAGATGCAGTTGAACAAGCAATTCAGTGGCTAGATAGCAATCAGCTGGCTGAATCGGATGAATTTGAAGACAAGATGAAGGAACTGGAGTCAATTTGCAACCCCATCATAGCCAAGATGTATCAGGGCGGTGCCGATATGGGCGGTGCTGCCATGAATGATGATGCTCCTCCTTCTGGTGGTAGTGGCGCTGGTCCTAAGATTGAAGAAGTGGATTAA | 1947 | 45.76 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFEDKMKELESICNPIIAKMYQGGADMGGAAMNDDAPPSGGSGAGPKIEEVD* | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 21670377 | 21673247 | - | CsaV3_5G026520.1 | Csa05g01833 | 530220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g01833 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Csa05g01833 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Csa05g01833 | 648 | MobiDBLite | consensus disorder prediction | 621 | 648 | - | - | |
Csa05g01833 | 648 | Gene3D | - | 546 | 619 | IPR029048 | - | |
Csa05g01833 | 648 | Gene3D | - | 71 | 126 | - | - | |
Csa05g01833 | 648 | Gene3D | - | 10 | 384 | - | - | |
Csa05g01833 | 648 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Csa05g01833 | 648 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 340 | 354 | IPR018181 | - | |
Csa05g01833 | 648 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Csa05g01833 | 648 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 628 | IPR013126 | GO:0005524|GO:0140662 | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Csa05g01833 | 648 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Csa05g01833 | 648 | Gene3D | - | 192 | 366 | - | - | |
Csa05g01833 | 648 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Csa05g01833 | 648 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Csa05g01833 | 648 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524|GO:0140662 | |
Csa05g01833 | 648 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 623 | IPR029048 | - | |
Csa05g01833 | 648 | Coils | Coil | 514 | 541 | - | - | |
Csa05g01833 | 648 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 545 | IPR029047 | - | |
Csa05g01833 | 648 | PANTHER | HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE | 1 | 628 | - | - | |
Csa05g01833 | 648 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g01826 | Csa-Chr5:21611631 | Csa05g01833 | Csa-Chr5:21670377 | 0 | proximal | |
Csa02g00701 | Csa-Chr2:5673429 | Csa05g01833 | Csa-Chr5:21670377 | 0 | transposed | |
Csa02g00905 | Csa-Chr2:8444104 | Csa05g01833 | Csa-Chr5:21670377 | 0 | transposed | |
Csa03g01338 | Csa-Chr3:10118261 | Csa05g01833 | Csa-Chr5:21670377 | 4.84E-92 | transposed | |
Csa03g02245 | Csa-Chr3:19766476 | Csa05g01833 | Csa-Chr5:21670377 | 1.17E-83 | transposed | |
Csa04g01169 | Csa-Chr4:10111427 | Csa05g01833 | Csa-Chr5:21670377 | 0 | transposed | |
Csa05g00196 | Csa-Chr5:1166017 | Csa05g01833 | Csa-Chr5:21670377 | 0 | transposed | |
Csa07g01387 | Csa-Chr7:14011638 | Csa05g01833 | Csa-Chr5:21670377 | 1.19E-180 | transposed | |
Csa07g02226 | Csa-Chr7:20922786 | Csa05g01833 | Csa-Chr5:21670377 | 4.22E-89 | transposed | |
Csa04g01476 | Csa-Chr4:14570618 | Csa05g01833 | Csa-Chr5:21670377 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g01833 | K03283 | - | csv:101211905 | 1249.57 |