Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g01875 | ATGGAAGTAATTGGTACAAATTTGAGCCCTATGATTATTATTGTATTAGCATTAAGCTTTGCAATATCAATCATCTTTCACCTTCTTCTTAAACTCTTTCTAGTTACTTCAAAAAAAAACCCTAATTTGCCTCCTGGCTCCATGGGCTTACCCTTTGTTGGTGAAACTCTTAGCTTCCTCAACCCTCATCATTCCAACTCAATTGGTACCTTCCTTCAACACCATTTCTCAAGGTATGGGAAGATTTTCAAATCTCGTCTATTCGGTAGGCCGGCCATAGTGTCATGTGATAGAGAGCTTAACTACTTCGTTCTTCAAAACGACGATAAGCTTTTCAAAGTAAGCTATCCAAAAGCAATGCATAATATTCTAGGTACCAATTCTTTGCTTATTAGCGCCGGCGACACTCACCGGAAACTTCGAAGTGTCATTGTTAGCTTCATCACCAGGTGCAAAACCAGACCCAATTTTCTTCACTCCCTCCACAATTTATCTGTCTCTTTAACGGACTCTTGGAGATCCCAAACCCATGTCTCCTTTATCAAAGAAATGAAGATGTTTGCTTTAAGCCTTATGGTGAAGGAAGTATTTGGCATCGAAGCAAAGGAGTTGATAGGGACAAAGATATTTGAAGAGTTTGAAACCTTTATGATAGGCTTTGTTTCTTTGCCTTTAAATTTCCCAGGAACTCCTTACTTTAAGGCTGTCAAGGCTAGAGGAAGACTTTCTACGATTGTGAAAGAGATGATAAGGGAGAGAAGAAAGAGAGGATTAGTTGGAGGGAATAATAATGATGATGATTTTCTACAAGTGTTAATGTCAAATAATTGGAAGCTTAGTGATGAAGAAATTGTGAGTGTTGTTTTGGACATAATGCTTGGAAGTTACGAGACAACAGCTACTCTCTTGGGATTGATTGTCTATTTTCTTGCTCATTCACCTCCTAATATTCTTGCAAAATTGAAGGAAGAACATCAAGCAATAAGAAATGGAAAAAGAAAGGGAGAATGTCTCAATTTGGAAGATTACAAGCGAATGGAGTTCACATTCAATGTGGCATATGAAGCCATGAGATGTGGGAATGTGGTGAAGTTTTTACATAGGGAAGCTATTACAGATGTCAAATTCAAAGATATTGTCATACCCAGTGGGTGGAAAGTTCATCCAGTTTTCTCAGCAATTCATCTTGATCCAACCCTTCATCCAAATCCACAACAATTTAATCCTTCCAGATGGAGTGATGATAAGGAAATGAACAAAAAAGTGACACCATTTGGTGGAGGGCCAAGACTTTGTCCAGGGATTGAGCTTGCCAAACTAGAGATTGCTTTTTTCGTTCATCATTTTGTCCTTAATTATAGGTGGAAGACAAGAGATGATGAATGTCCACTAGCTTACCCATATGTTAAATTTAAAAGAGACTTGATGCTTGAGATTGAGCCCTTGCAGCTACTCAAATGA | 1461 | 38.26 | MEVIGTNLSPMIIIVLALSFAISIIFHLLLKLFLVTSKKNPNLPPGSMGLPFVGETLSFLNPHHSNSIGTFLQHHFSRYGKIFKSRLFGRPAIVSCDRELNYFVLQNDDKLFKVSYPKAMHNILGTNSLLISAGDTHRKLRSVIVSFITRCKTRPNFLHSLHNLSVSLTDSWRSQTHVSFIKEMKMFALSLMVKEVFGIEAKELIGTKIFEEFETFMIGFVSLPLNFPGTPYFKAVKARGRLSTIVKEMIRERRKRGLVGGNNNDDDFLQVLMSNNWKLSDEEIVSVVLDIMLGSYETTATLLGLIVYFLAHSPPNILAKLKEEHQAIRNGKRKGECLNLEDYKRMEFTFNVAYEAMRCGNVVKFLHREAITDVKFKDIVIPSGWKVHPVFSAIHLDPTLHPNPQQFNPSRWSDDKEMNKKVTPFGGGPRLCPGIELAKLEIAFFVHHFVLNYRWKTRDDECPLAYPYVKFKRDLMLEIEPLQLLK* | 487 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 21981719 | 21986438 | + | CsaV3_5G026940.1 | Csa05g01875 | 530262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g01875 | 486 | SUPERFAMILY | Cytochrome P450 | 39 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g01875 | 486 | PRINTS | E-class P450 group I signature | 76 | 95 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | E-class P450 group I signature | 283 | 300 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | E-class P450 group I signature | 390 | 414 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PANTHER | CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 | 47 | 481 | - | - | |
Csa05g01875 | 486 | PRINTS | P450 superfamily signature | 294 | 311 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PRINTS | P450 superfamily signature | 432 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | PANTHER | CYTOCHROME P450 26 | 47 | 481 | - | - | |
Csa05g01875 | 486 | Pfam | Cytochrome P450 | 44 | 463 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g01875 | 486 | Gene3D | Cytochrome P450 | 34 | 479 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g00509 | Csa-Chr4:3345127 | Csa05g01875 | Csa-Chr5:21981719 | 2.71E-128 | dispersed | |
Csa05g01875 | Csa-Chr5:21981719 | Csa07g02396 | Csa-Chr7:22043310 | 8.70E-83 | dispersed | |
Csa05g01875 | Csa-Chr5:21981719 | Csa03g04086 | Csa-Chr3:35819170 | 1.83E-88 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g01875 | K12639 | - | csv:101215045 | 983.4 |