Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02212 | ATGAAGCTCCTTGTTCTAGCCACCCTCACCATCTCACTGCTCTTCCCTTTCAGCCTCCTCAATTTCCTCTTCTGCTCTCTCCTCGCCTTCTCTCTCAACTACTGGCTCATCCCCGGTGGATTTGCGTGGCGTAATCACCACCGCTTCTCTGTCAACCTCCCTGGACCCTCTGGTTGGCCACTCCTTGGCACGCTTCCACAAATGGGGCCACTTGCTCACCGGAATCTTGCTACCATTGCTCACTCCTTCAAAGCCACACGCCTCATGTCCTTTAGCATGGGCGCTACTCGGGCCATCATAAGTAGCCACCCTGACACGGCCAAACAGATTCTCTGTGGGTCAGCTTTCTCCGACCGACCGGTCAAGCAATCGGCTAGGCTCATGATGTTCGAGAGAGCCATTGGCTTTGCTCCAAATGGGGCTTATTGGCGCAATCTTCGACGAATTGCAGCCAACCACATGTTTTCCCCACGGAAAATCTCCGACCTGGAGGGGCTCCGTAGGGAGGTGGCGGATGAAATGGTGGCAGAGCTGTCGGGAAATATGGCAAGTGAGGGGGTGGTGAGGCTGAGAGAAGTGCTGCAGAAGCATTCTTTGAAGAACATAATAGAGAGTGTGTTCGGGAGTGGTATGGGGATGGGAAGGAAGGGAGAGCTGAGTGATATGGTGAGAGAAGGGTATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCGGTCAGCTTTTTGGATTTTAGTGGAGTGAAACGAAGGTGCAATGAATTGGCGGGCAGGGTTAATGTGGTAATTGGACAGATCGTTGAAGAGAGAAAAAGAGAAAATACTGAGTTTCATAATGATTTTCTTACTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTGAGTGATTCAGATATGGTGGCTGTTTTATGGGAAATGATATTTCGTGGAACCGACACTATAGCAATACTCCTAGAATGGATAATGGCGAGAATGATATTACACCCAGATATCCAAGCCAAAGCTCAGAACGAGATTGACACGTGCGTCGGGTGCAATAGGCACGTGTGTGATTCCGACATACCGAACCTTCCCTACCTCCAAGCAATAGTGAAAGAGGTTCTTCGTCTACATCCTCCGGGGCCATTACTCTCGTGGGCCCGGTTGGCAATCCACGATGTCCATGTGGACAAGATCTTGATCCCAGCTGGCACAACGGCGATGGTGAACATGTGGGCCATAGCCCACGACCCGTCGATATGGAAAGACCCATGGACATTTAAGCCAGAACGGTTCATTGAAAATGACATGTCGATCATGGGTTCGGACTTGAGGTTGGCGCCATTTGGGGCTGGGCGAAGGGCGTGTCCAGGTAGGGCTTTGGGTTTAGCCACTGTGCACCTATGGCTAGCCAATTTTCTGCACCGATTTAGATGGACTCCATGTTCATCCACTAAGTCGGTTAATTTGTCAGAGTGTTTGAAGTTATCACTTGAAATGAAGAAGCCTTTGAAATGTTGTGTGGTTGGTCGATGA | 1518 | 49.6 | MKLLVLATLTISLLFPFSLLNFLFCSLLAFSLNYWLIPGGFAWRNHHRFSVNLPGPSGWPLLGTLPQMGPLAHRNLATIAHSFKATRLMSFSMGATRAIISSHPDTAKQILCGSAFSDRPVKQSARLMMFERAIGFAPNGAYWRNLRRIAANHMFSPRKISDLEGLRREVADEMVAELSGNMASEGVVRLREVLQKHSLKNIIESVFGSGMGMGRKGELSDMVREGYELIAMFNWEDYFPVSFLDFSGVKRRCNELAGRVNVVIGQIVEERKRENTEFHNDFLTTLLTLPKEDQLSDSDMVAVLWEMIFRGTDTIAILLEWIMARMILHPDIQAKAQNEIDTCVGCNRHVCDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFKPERFIENDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLANFLHRFRWTPCSSTKSVNLSECLKLSLEMKKPLKCCVVGR* | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 24906086 | 24909220 | - | CsaV3_5G030310.1 | Csa05g02212 | 530599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02212 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g02212 | 505 | Pfam | Cytochrome P450 | 54 | 487 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | Gene3D | Cytochrome P450 | 43 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PANTHER | CYTOCHROME P450 78A7-RELATED | 6 | 505 | - | - | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02212 | 505 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED | 6 | 505 | - | - | |
Csa05g02212 | 505 | SUPERFAMILY | Cytochrome P450 | 54 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g00614 | Csa-Chr1:3922185 | Csa05g02212 | Csa-Chr5:24906086 | 0 | dispersed | |
Csa05g02212 | Csa-Chr5:24906086 | Csa06g00898 | Csa-Chr6:7236157 | 6.46E-173 | dispersed | |
Csa05g02212 | Csa-Chr5:24906086 | Csa06g02088 | Csa-Chr6:18629600 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02212 | - | - | csv:101212611 | 1007.28 |