Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02265 | ATGATGATGAATAGCATTCTCATATGGTTTCCTCTCCTTTTTCTCTTAACTTCTCTACTTCTTCTCAAAACAAAAAAGCTTATTCACAGCAACAACAAGAAGCTTATTACTAATCCTCCTCCAAGCCCTCCAAAGCTTCCTTTATTGGGTCATTTACACCTCCTTGGCTCCCACCCTCATCACTCTTTATGCAACCTTTCACGAACACACGGTCCCATCATGCTTCTGAAACTCGGCTCCATCCCGACCGTCGTCATCTCTTCCGCAACAGCCGCGAGAGAACTATTCAAACACCACGATCTCGCATCTTGCAGCCGCCCTCGCTTAATGGGAAGTGGAAGATTTTCCTACAACTTTCAAGACCTGAGTTTGTCTCCATATGGCGAGCGTTGGAAAGAGCTTCGAAAAATTTTCATGCTCGAGCTTTTTAGTACTAAACGAGTGCAATCATTTCATCGTATTAGAGAAAAGGAAGTGAGTTTGCTCATAAACTCAATCTCTCAACAATCCTTAAACTTTTCTTCAAATCCAATTGATTTGAGTGACAAAAGCTATTCTCTTACTGCCAATATTACAACAAGAATTGCTTTTGGGAAGAGCTTTAGAGGGGGTGAATTAGATAACAAAAATTTTCAAAAGCTTGTGCGTGGAGCAATTGACGCCTTGAAAAGCTTCTCGATTACCGATTTCTTTCCGAGTTTCGGTTGGATCTTTGACCGAATCAGTGGTGTTCATGGGAAGTTGGAGAAGAGCTTTGGTGAGATGGATGCTTTTTTTCAAAAGGTAGTTGATGATCGTATAAACTTGGACAAGGCAAATTCTAGAAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGAAGAGAGATGGCTTTCAATCTGAGGCACTCATCCTTACACAAGATTGCATTAAAGCACTAATCATGGATATCTTTCTAGCAGGAGTGGAAACAGGAGCAAGCACCATTGTTTGGGCAATGACAGAGCTAATTAGAAACCCAAGAGTAATGAAAAAGCTACAAGACCATATCAGAAGCCACATAAAAAAAGATCAAGTAAAAGAAATGGACCTGGAAAGGCTTCCATACCTAAAAATGGTAGTGAAAGAGGTTCTAAGGTTGCATCCAGCCGCCCCACTTCTCCTTCCAAGAGAGACCACGTCTCATTTTAAGCTCAATGGTTATGATATACATCCCAAAACTCATCTTCATGTCAATGTGTGGGCTATTGGACGAGATCCAGAATGTTGGACTAACCCTGAAGAGTTTTTTCCAGAAAGGTTTACAGAAAGTAATATTGATTATAAAGGACAAAACTATGAGTTATTACCTTTTGGAGGTGGTAGAAGAGTTTGTGCAGGAATGAATATGGGAATTTTTACAATAGAATTGACATTAGCTAATTTGTTACTTTGTTTTGATTGGAAATTGGGAGATGGAATGAAAGAAGAAGATGTAGATATGGAAGAGGATTTTGGTCTTACTGTTGCCAAAAAGTCACCTCTTGAACTCGTTCCCATCCCTTACTTAGCTTAA | 1536 | 39.58 | MMMNSILIWFPLLFLLTSLLLLKTKKLIHSNNKKLITNPPPSPPKLPLLGHLHLLGSHPHHSLCNLSRTHGPIMLLKLGSIPTVVISSATAARELFKHHDLASCSRPRLMGSGRFSYNFQDLSLSPYGERWKELRKIFMLELFSTKRVQSFHRIREKEVSLLINSISQQSLNFSSNPIDLSDKSYSLTANITTRIAFGKSFRGGELDNKNFQKLVRGAIDALKSFSITDFFPSFGWIFDRISGVHGKLEKSFGEMDAFFQKVVDDRINLDKANSRNEENIVDVLLRMKRDGFQSEALILTQDCIKALIMDIFLAGVETGASTIVWAMTELIRNPRVMKKLQDHIRSHIKKDQVKEMDLERLPYLKMVVKEVLRLHPAAPLLLPRETTSHFKLNGYDIHPKTHLHVNVWAIGRDPECWTNPEEFFPERFTESNIDYKGQNYELLPFGGGRRVCAGMNMGIFTIELTLANLLLCFDWKLGDGMKEEDVDMEEDFGLTVAKKSPLELVPIPYLA* | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 25272014 | 25274439 | - | CsaV3_5G030840.1 | Csa05g02265 | 530652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02265 | 511 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PANTHER | CYTOCHROME P450 71B11-RELATED | 5 | 508 | - | - | |
Csa05g02265 | 511 | Pfam | Cytochrome P450 | 40 | 494 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 187 | 205 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g02265 | 511 | PANTHER | CYTOCHROME P450 71B16-RELATED | 5 | 508 | - | - | |
Csa05g02265 | 511 | Gene3D | Cytochrome P450 | 25 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g02265 | 511 | SUPERFAMILY | Cytochrome P450 | 40 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g02265 | Csa-Chr5:25272014 | Csa05g02270 | Csa-Chr5:25298556 | 0 | dispersed | |
Csa05g02264 | Csa-Chr5:25259441 | Csa05g02265 | Csa-Chr5:25272014 | 1.92E-159 | tandem | |
Csa05g02265 | Csa-Chr5:25272014 | Csa05g02266 | Csa-Chr5:25282348 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02265 | - | - | csv:101216216 | 943.725 |