Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02351 | ATGGCATCAAGATCTACCGCTAACTTTTTGGACTTGGCTTCTGGAGATTTACTGGATGTTCCTCGTACACCCAGGTCCCTGCCACGAGTTATGACTGCTCCTGGAATTATTTCTGAATTGGATGATTATGGGAGTAATGACGGAGACTCGGAGTCTTCATCTGTATACCGTGAGCGCAAAATCATAGTTGCAAATATGTTACCTGTGCACGCTAAAAAAGATGGGCAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGGTTTTCACCTGAAATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAGCAGGAGGAGGTTGCTCAGAAACTGTTCGACAATTTTAACTGTGTACCTACATTTCTTCCTCATGATCTCCAGAAGAACTTTTATATTGGGTTTTGCAAACAGCAGCTATGGCCCTTATTTCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCAGCTCTGGCAAGCCTATGTTTCTGCTAATAAACTATTTGCTGATAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTGTTTGGGTTCATGATTATCATTTAATGGTTCTTCCTACATTCCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGTCTGTTAAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCCCGTCACTTCCTCTCATGCTGTAGCAGAATGTTGGGCTTGGATTATGAATCGAAGCGTGGTCATATTGGACTAGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGCATTCACATGGGCCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTAAAAGAAATTCGAGATCAGTTCATGGGGAAGAAATTAATTCTTGGTATTGATGATATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTTGCTGTGGAACAGCTTTTACGGCATCATCCTGCGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGGAAAGATGTGCATGAAGCTCAGAAGGAAGCCTACTTGGCTGCTGAAAGGATCAATGAAGCTTACGGTTCAAGTAACTACAAACCAGTAATTCTGATTGATCGCCACGTCCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAAGGAACTCCTCTTATGGATGAGGCTATGGGCTTACAAATTGGTTCTCCTCGAACGAGTATGCTTGTGGTGTCTGAGTTTATTGGTTGCTCGCCTTCTTTAAGTGGAGCAATCAGGGTTAATCCTTGGGACATTGATGCTGTTGCCGATGCATTGGAACTAGCCATAACCATGCAGGAGTCAGAGAAGCAGCTGCGACATGAGAAACATTATCGATATGTCAGTTCCCACGATATTGGATATTGGTCTCGTAGTTTTATGCAAGATTTGGATAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGTTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACCATCGATCACATTGTCTCGGCTTATAAAAGAACTCATAGAAGAGCAATATTTTTAGATTATGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCGAGCCCTGAAGTTATCTCAGTCTTGACTACTCTTTGCAACGATCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTTGTCTCTTGTGAGATGTTGGGGATTGCAGCGGAACATGGGTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACTAGTCCACTGTCTTCTGATCTTGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACGGAAGCAACAGATGGCTCGTGCATAGAACAGAAAGAAAGTGCTTTAGTCTGGCACCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAACGAACCAGCCGTTGTTAAAAGAGGCCAGCATATTGTTGAAGTGAAACCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCAAGAATGGTGGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATAGATCAGATGAAGATATGTTTGAGAGCATATTAAGTACCGTCTCCAGTCCTTCACTCCCTTCCGCTCCAGAAATCTTCGCCTGTACTGTTGGACGAAAGCCAAGCAAGGCTAAGTTTTACCTCGATGATACTTCCGACGTCGTTAAATTGCTGCAATGCCTTGCCTCGTCGTCACGTCCAAGACCCCGACAACTACCACAGATGCGTGTTTCTTTCGAGAGTGTTTTCTAA | 2583 | 43.21 | MASRSTANFLDLASGDLLDVPRTPRSLPRVMTAPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPVHAKKDGQSGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDASEQEEVAQKLFDNFNCVPTFLPHDLQKNFYIGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKLFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRHHPALRGKIVLVQIVNPARGSGKDVHEAQKEAYLAAERINEAYGSSNYKPVILIDRHVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDEAMGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFVSCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEQKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF* | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 25831660 | 25837480 | + | CsaV3_5G031700.1 | Csa05g02351 | 530738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02351 | 860 | Gene3D | - | 590 | 717 | IPR023214 | - | |
Csa05g02351 | 860 | Gene3D | - | 719 | 848 | IPR023214 | - | |
Csa05g02351 | 860 | Gene3D | Glycogen Phosphorylase B; | 52 | 311 | - | - | |
Csa05g02351 | 860 | TIGRFAM | HAD-SF-IIB: HAD hydrolase, family IIB | 592 | 793 | IPR006379 | - | |
Csa05g02351 | 860 | CDD | GT20_TPS | 59 | 543 | IPR001830 | GO:0003824|GO:0005992 | |
Csa05g02351 | 860 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 548 | - | - | |
Csa05g02351 | 860 | CDD | HAD_TPP | 592 | 833 | - | - | |
Csa05g02351 | 860 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 1 | 847 | IPR001830 | GO:0003824|GO:0005992 | |
Csa05g02351 | 860 | Pfam | Glycosyltransferase family 20 | 59 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
Csa05g02351 | 860 | Pfam | Trehalose-phosphatase | 594 | 829 | IPR003337 | GO:0003824|GO:0005992 | |
Csa05g02351 | 860 | SUPERFAMILY | HAD-like | 591 | 839 | IPR036412 | - | |
Csa05g02351 | 860 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
Csa05g02351 | 860 | PANTHER | ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED | 1 | 847 | - | - | |
Csa05g02351 | 860 | TIGRFAM | T6PP: trehalose-phosphatase | 589 | 839 | IPR003337 | GO:0003824|GO:0005992 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g02351 | Csa-Chr5:25831660 | Csa06g03720 | Csa-Chr6:29732744 | 0 | dispersed | |
Csa01g00164 | Csa-Chr1:1067140 | Csa05g02351 | Csa-Chr5:25831660 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02351 | K16055 | - | csv:101212688 | 1746.48 |