Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02357 ATGATAATGGAAGTAAAGGGAGGAGGAATATTGGAAATGGTGGTTCCATTTTTAGCTATGGTCACCATGGAGGGTTGCACAATTGCATTAACAATATTGGCTAAAACAGCCATTACTTATGGAATGTCTACTTTTGTTTTTGTTGTTTATACAAATGCTGTTGCTTCCATCATTCTTCTTCCTTATTCCTTCATCTTTCATTACAATCAAAGATTGGAATTTCAACAATCTTTGTTTTCCTTTCCTCTTCTCCTTCGAGTTTTCCTCTTGGGTTTAACTGGGATATGTATATCTCAAAACCTAGCATTTTTGGGCCTAAGTTACAGCTCTCCCATTGTTGTATGTGCAATGGGTCTTATGCTTCCGGCCATTTCCTTCCTACTCTCAATCCTTCTCGGGAAGACAAAAATGGAGTGGAAAAATCCCAACTTCATAACAAAAGTGGTTGGGACAGTTATTTCAGTTGTAGGAGCAACATGCGAAGAAGTTTACCTAGGCCCAACTGTACGGCAACATCCATCTTCTTCGACACATTTACAGTTTAAACAGAAGCTTTTGGTGTTTACTTCAACCACAGATCGTTGGATTTTTGGTGGCCTTTTATTAGCAGCTGCTACATTATGTGTCTCTATATGGAACATTATTCAGTTGGGAGTTGTAAAACAGTACTCGCAAGTGATGAAAGTTGGCTCATTTTATAGTATAGTGGGCACATTTATGTCAGCAATTGTGGCTTACTTTGTTGTCAATGATTCAAGTGCATGGACAGTCAAATCTAGCTTCGACCTCTATCTCATCATTGCAACTGGAACTTTTAGCGGTTTGATTCGAAATCGAGTGCAAATATGGTGCATGCAAAAGAAAGGGCCGTATTATGTGCCCATGTTTAAGCCTTTTGGTATTCTGTTTGCTACCTTCTTTGGTGCCACCTTCTTTGGCGACACTTTTCACTACGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGGTATTTAACAGTAATGTGGGGGCAAATTAACGAAGATCGTGGAGTAGGAAAAGACAAAGATATTAACAAGAACAATGATGATTCATTGTCTTCAGCCAAAGTTCCACTTCTTGATGATGAAGAATCAAATGTGTAA 1125 38.93 MIMEVKGGGILEMVVPFLAMVTMEGCTIALTILAKTAITYGMSTFVFVVYTNAVASIILLPYSFIFHYNQRLEFQQSLFSFPLLLRVFLLGLTGICISQNLAFLGLSYSSPIVVCAMGLMLPAISFLLSILLGKTKMEWKNPNFITKVVGTVISVVGATCEEVYLGPTVRQHPSSSTHLQFKQKLLVFTSTTDRWIFGGLLLAAATLCVSIWNIIQLGVVKQYSQVMKVGSFYSIVGTFMSAIVAYFVVNDSSAWTVKSSFDLYLIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGILFATFFGATFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDRGVGKDKDINKNNDDSLSSAKVPLLDDEESNV* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25883079 25886085 + CsaV3_5G031760.1 Csa05g02357 530744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02357 374 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
Csa05g02357 374 Pfam EamA-like transporter family 30 158 IPR000620 GO:0016020|GO:0016021
Csa05g02357 374 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Csa05g02357 374 MobiDBLite consensus disorder prediction 347 374 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03911 Csa05g02357 CCT
Csa03g03911 Csa05g02357 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02357 Csa-Chr5:25883079 Csa05g02916 Csa-Chr5:29640781 5.10E-71 dispersed
Csa03g03910 Csa-Chr3:34287103 Csa05g02357 Csa-Chr5:25883079 1.98E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02357 - - csv:101210157 688.337