Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02377 ATGGATTCTCTATCGCACCTTATTCTCTTCCTCTTCTTCCTTTCTCTTTCCCCTCTTTCCTACTCCCAACTCAGCCCCCCTCAAAATATCGAAACTTACTACCCTTTCCCTCAACCGCCCTCGCCCTCCTCTTCTTCAGTTGACCATCCGCCATCGTCCACGTCCACCAAGACCATCGCCACCGCGGTGGCCGTCACTGCTGTCGGTGTTGCTCTGATTTCCACCTTCTTCTTCTTTTTAATACAGAGATATGTTATCGGAAGAAAGAGGAAAACAGAGGTCGTAAATTCAGGGACGGGTTCGGGTTCGGGTTCGGCAGTGCCACCGGCGGTTGCGCAGAGTGATTTTTCGCGGGTTGATGGGAATCTTAAAGGCTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAAACTTGAACAAAGGAAATCCAAAAATAGCTTTGATCGGGATGTTGAAGGTAATGTTAAGGAAAACCGAACAAAAAAGTCTGAGCCTGTTCAAGAAATTCCTCTGCTTCGAGGAAAATCTTCAACTTCGCATGTTAAAATTGCACCCGAAGATGAAGACGATAGTCGGATTACATCGCCACCGCCTCCTCCGCCGCCCCAGGTTAACCAACCTCCGCAATTTACTGCGATTTCGGTTCAGGCTGTTGGAAAATCACCAAGTAGTTCAAATCTTTCATCAACAGCACCAACGCAATCGACGGGAAATCAGGTACCTCCGAAACAATCTCCAATGGCCGTTCCGCCACCGCCCCCACCTATTCCAGCCAAGACCAATTCAAGACTGCCGCCGCCGCCACCTCCCATTCCCAAGACCAATTCAAGACCGCCGCCACCGCCGCCTCCTATTCAACCCAAGACCAACTCCGCAGGACCACCTCCTCCTCCTATACCGGCCAAGGCAAATCCGTCAGCACCACCGCCACCACCGCCCAAGGCCGGCGGTTCAAAATTACCCTTAAGGCCTGCACCTCCAAAAGAGAGTAACAAATCTTCTGCAGAGGCTTCTTCATCAGCTGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCCAATGCCGATCATTCCATGGTTTGGGACAAAATGACCGCCGGTTCTTTCAAATTCGATGGGGATCTTATGGAAGCTCTCTTTGGATATGTCGCAACCAACCGGAAATCCCCCCGGAGTGAAGCTAGTTCTTCAGCAACCGCCGTTGGTCGGAACTCGGGGCCGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATCGCCATTGTAATCAAGTCCTTAACAGTTCCTCGCAACGACATCCTCGATGCACTCAACGAAGGTCAAGGCCTGGAAACAGAAGTTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAAAGGAGATCACCAGAAGCTAGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCGGCCTTTACGCGCTTCAACGCCATGCTTTTCCGATTGAATTTTACATCAGATATTCTCCATCACAAGGAATCTCTACAAACTCTGGAATCCGCTTGCAAGGAGCTTAGGACACGAGGATTGTTTATGAAACTTCTTGAAGCAATTCTCAAAGCTGGGAACCGGTTGAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAATCTTACAGCTCTTCGAAAGCTCTCTGATGTTCGAAGCACTGATGGGAAAACCACTTTGCTTCATTTTGTAGTCCAGGAAGTGATCAGGGCAGAAGGGAAAAGGTGTGTTTTAAACAGGAACAAGAGCTTGAGCCGTAATAGCAGCCGTAGCAGCGACAACAGCTTTAGCAGCTTAGAAAACTCGGCTGCGAAGGAGGACAGAGTGAAGGAATACATGATGTTGGGATTGCCAGTGGTGGGAGGTCTAAGCTCCGAATTCTCTCATGTAAAGAAAGCGTCGGCGATCGACTACGAGAGCTTCGTCAAGGCAGGGACGTCCCTGACTAGTCGAACCGAAGAAATCCGGAAGCTCCTGACTCAAATGGGGAACAATGAAGGTGGGTTTGCGAAGGAAATGAGAGAATTTCTTGATGCAGCAGAGAATGAGCTGAAGATGGTAAGAGAAGCACAAACGAAGGTGATGGATTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCTAAAGATAAAGAAACAAATCGGCTTCAATTGTTTATTATAATTAAAGATTTTCTAGAAATGGTAGATCGAGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAAGAGATCGTCAGCAGTAAATGCAGGCACAGGTTCGGGTTCGTTGCCGGGGAGATCAAAAGCCATTTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCTAGAGGGAGTTCTAGTGATACAGATGATGAATTCTGA 2457 47.13 MDSLSHLILFLFFLSLSPLSYSQLSPPQNIETYYPFPQPPSPSSSSVDHPPSSTSTKTIATAVAVTAVGVALISTFFFFLIQRYVIGRKRKTEVVNSGTGSGSGSAVPPAVAQSDFSRVDGNLKGFIVDENGLDVIYWKKLEQRKSKNSFDRDVEGNVKENRTKKSEPVQEIPLLRGKSSTSHVKIAPEDEDDSRITSPPPPPPPQVNQPPQFTAISVQAVGKSPSSSNLSSTAPTQSTGNQVPPKQSPMAVPPPPPPIPAKTNSRLPPPPPPIPKTNSRPPPPPPPIQPKTNSAGPPPPPIPAKANPSAPPPPPPKAGGSKLPLRPAPPKESNKSSAEASSSADNGQVKMKPLHWDKVNTANADHSMVWDKMTAGSFKFDGDLMEALFGYVATNRKSPRSEASSSATAVGRNSGPSQTFILEPKKSQNIAIVIKSLTVPRNDILDALNEGQGLETEVLEKLTRIALTQEEISQILAYKGDHQKLADAESFLYHLLKSVPSAFTRFNAMLFRLNFTSDILHHKESLQTLESACKELRTRGLFMKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSLSRNSSRSSDNSFSSLENSAAKEDRVKEYMMLGLPVVGGLSSEFSHVKKASAIDYESFVKAGTSLTSRTEEIRKLLTQMGNNEGGFAKEMREFLDAAENELKMVREAQTKVMDLVMKTTEYYQAGSSKDKETNRLQLFIIIKDFLEMVDRVCVEITRDLQRKRSSAVNAGTGSGSLPGRSKAIFHNLPENFMSDKSRGSSSDTDDEF* 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25983345 25986387 + CsaV3_5G031960.1 Csa05g02377 530764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02377 818 MobiDBLite consensus disorder prediction 32 53 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 334 348 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 247 323 - -
Csa05g02377 818 Pfam Formin Homology 2 Domain 344 760 IPR015425 -
Csa05g02377 818 MobiDBLite consensus disorder prediction 396 419 - -
Csa05g02377 818 SMART it6_source 341 774 IPR015425 -
Csa05g02377 818 ProSiteProfiles Formin homology-2 (FH2) domain profile. 341 785 IPR015425 -
Csa05g02377 818 MobiDBLite consensus disorder prediction 32 46 - -
Csa05g02377 818 SUPERFAMILY Formin homology 2 domain (FH2 domain) 354 773 - -
Csa05g02377 818 PANTHER FORMIN-LIKE PROTEIN 4 7 814 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 148 350 - -
Csa05g02377 818 Gene3D Formin, FH2 domain 339 770 IPR042201 -
Csa05g02377 818 Coils Coil 698 718 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 397 419 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 211 246 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 148 171 - -
Csa05g02377 818 MobiDBLite consensus disorder prediction 611 630 - -
Csa05g02377 818 PANTHER FORMIN-RELATED 7 814 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02377 Csa-Chr5:25983345 Csa06g02244 Csa-Chr6:20168345 5.93E-16 dispersed
Csa05g02377 Csa-Chr5:25983345 Csa02g01413 Csa-Chr2:13503958 1.07E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02377 - - csv:101208197 1315.06