Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02389 ATGAGTGGATGGGATAGGGTTAGACCATCGAGTTCGAGATTTGGGCGTGGTAATTATTCTGCAATGAACGAGAGGACCGCCTCTACTACAACGGTTCGACTCGGTCGAGTCCAGCCACAGGCACCTGGACATCGCACCATCTTCTGCAATGATCGCGACGCTAATCTTCTTGTCAAATTCAAGGGGAATTCAGTTTCTACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGCTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTCCCGTGCATCCCATTACAAATGTGGTCCCTTTAAGTTTGGTTCTACTCGTCTCACTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTGCAAGATCAAAAGTGGGAGAGTGTTCCGTGGAAAAGGTTGCAGGTTGGAGACATTGTTAGGGTTCGACAAGATGGATTTTTTCCTGCTGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACCGCTAACCTTGATGGCGAGACAAATTTGAAGATTAGGAAAGCTCTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGTGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTACTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTGGGGCTGTTATTTTTACTGGCCATGAAACGAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAAAAGAAACTTGACAAGCTTATACTTACGCTGTTTGCTACTCTATTTGTGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACGAAGAGTACTACTACTTAGCTCTTGATAAGGGAGGCGAAAACCAATTCAACCCTCGCAACCGATTCCTGGTTATCATTCTGACCATGTTTACCTTGATTACTCTATACTCAACAATCATTCCTATTTCTCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCGACACAATATATCAATAAGGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCCAGAACTTCCAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGGATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGCACACAAATCAGCCAATGCTGTTCAAGAAAAGGGATTTAACTTTGATGATCCTAGGCTTATGAGGGGAGCATGGAGAAATGAGCCCAACTCTGACCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTTCCTGAGGGTGATGAATCCCCAGAAAAGATCACATATCAGGCCGCATCACCTGATGAGGCTGCCTTGGTGGCTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACCCCTACTACAATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATCCAAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGAAAGCGTCAGTCTGTGGTGTGTCGTTATTCTGATGGCAGGCTTATCTTGTATTGCAAGGGTGCTGATACCGTTGTATATGAGAGATTGGCTGGTGGAAATGATGATCTGAAGAATATAACTAGGGAGCACTTGGAGAAGTTTGGATCTTCCGGTCTGAGAACCCTGTGCCTTGCTTACAGAGATTTGCATCCTGATGTGTATGAAAGCTGGAACGAGAAATTCATTCAAGCTAAATCTTCACTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTGATAAACAATGAGATGAAACAATTTATTATCAGTTCAGAAACGGATGAAATCAGAGAAGTTGAGAACAGGGGTGACCAAGTAGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAAAGGAACTGAAGAGATGCCTTGAGGAAGCACAGCTGTGTTTACATTCTATCCCTCCACCAAAATTGGCTCTCGTTATAGATGGAAAATGTTTGATGTATGCACTAGATCCAAGTCTGCGAGTTACTTTACTAAAATTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTTTGGTGAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCAAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCCCAGTTTCGCTTTCTCACAGATTTACTTCTTGTGCATGGACGATGGTCATATCTTCGAATATGCAAGGTTGTCACATACTTCTTTTACAAGAATCTTACGTTCACTTTAACTCAGTTTTGGTTTACCTTCCAAACTGGGTTTTCTGGTCAAAGATTCTACGACGATTGGTTCCAGTCACTTTATAATGTCATATTCACCGCACTACCTGTAATAATTGTTGGACTATTTGACAAGGATGTCAGTGCTGCCCTTTCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGTGTTTTTCAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCGTTTACCAATCTTTAGTCTTTTACTATTTTGTAACCGCTTCTAGTTCCAGTAGTCAATCGTCATCAGGCAAGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGGCTGCTTATGATCTGTAATTCAATTACTCGGTGGCACTACATTACGGTTGGGGGAAGCATTTTAGCATGGTTCTTATTTATTTTCTTATATTCCGGTATTATGACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATATTTTTACGTAGCTGTTATCCTCGTTCCCGTTGTTGCACTTCTTTGTGATTTCGCTTACCAAGGCCTTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCCGAAGGTAGAGGAACTGCAGGATTGCTTGAAATTCAAAACCATCTTACACCGGAAGAGGCAAGAAGCTACGCCATGTCTCAACTCCCCCGAGAATTATCAAAGCACACTGGCTTTGCTTTCGACTCACCTGGCTACGAGTCATTTTTTGCGGCACAGCTTGGTATTTATGCCCCACAGAAGGCATGGGATGTTGCTAGGAGAGCCAGTGTGAAGTCAAGACCAAAGATTAGGGAAAAGAAGTAA 3684 41.21 MSGWDRVRPSSSRFGRGNYSAMNERTASTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFVMCLIGAIGSGVFVNEEYYYLALDKGGENQFNPRNRFLVIILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEAHKSANAVQEKGFNFDDPRLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVAAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLILYCKGADTVVYERLAGGNDDLKNITREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDEIREVENRGDQVELARFIREEVKKELKRCLEEAQLCLHSIPPPKLALVIDGKCLMYALDPSLRVTLLKLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSAALSKKYPELYREGIRNVFFKWRVVTTWAFFSVYQSLVFYYFVTASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDFAYQGLQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIREKK* 1228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26049570 26062989 - CsaV3_5G032080.1 Csa05g02389 530776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02389 1227 Pfam Phospholipid-translocating ATPase N-terminal 47 111 IPR032631 -
Csa05g02389 1227 Pfam Cation transport ATPase (P-type) 522 615 - -
Csa05g02389 1227 MobiDBLite consensus disorder prediction 1 20 - -
Csa05g02389 1227 Pfam E1-E2 ATPase 143 376 - -
Csa05g02389 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 934 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Csa05g02389 1227 Gene3D - 524 688 IPR023299 GO:0000166
Csa05g02389 1227 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 24 1223 - -
Csa05g02389 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 694 IPR023299 GO:0000166
Csa05g02389 1227 Gene3D - 125 290 - -
Csa05g02389 1227 SFLD C1.7: P-type atpase like 405 906 - -
Csa05g02389 1227 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Csa05g02389 1227 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Csa05g02389 1227 Gene3D - 689 895 IPR023214 -
Csa05g02389 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1133 IPR023298 -
Csa05g02389 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Csa05g02389 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Csa05g02389 1227 CDD P-type_ATPase_APLT_Dnf-like 62 1015 - -
Csa05g02389 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 60 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Csa05g02389 1227 SFLD p-type atpase 405 906 IPR044492 -
Csa05g02389 1227 SUPERFAMILY HAD-like 411 898 IPR036412 -
Csa05g02389 1227 SUPERFAMILY Calcium ATPase, transduction domain A 142 286 IPR008250 -
Csa05g02389 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01695 Csa-Chr4:16360280 Csa05g02389 Csa-Chr5:26049570 0 dispersed
Csa05g02389 Csa-Chr5:26049570 Csa05g02560 Csa-Chr5:26977036 0 dispersed
Csa05g02389 Csa-Chr5:26049570 Csa01g00638 Csa-Chr1:4052892 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02389 K14802 - csv:101207069 2422.51