Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02395 ATGCCTTCTCCATCTCCCCTTTTTACCATTTCCGCCATTCTTCTCTTCTCCCTTCTCTTCCACGTTCACTCTTTTTGTCCACCTTTCTCTTCCCAACCTCGTTTCCCCTTTTCCTCTGTTTCCGGTCATGGCCATCCTTCTTTTCAGGTCCATTGCTCTTCTCCTCACTCTCTTATTTCCATTAATGGCCTTTCCTTTTCTCTTCTAAGTTTCAATATCTCCTCCACCACTCTCCTCCTTTCTCCTCTTCCACTTAATCTCACTCCCACTCCCAAACAATCCAATCATTCCTGTTTTTCTCTTCGTTCTTCTTCTATTCCCACCCGTTCCATTGATTTCTCTGGCTCCCCTTTTCGAATCTCAGATGGGTATTGTTCTAGACTCTCCCTTCTTCGCCCTTGTTCGCCTCCTCATCTACCCAATTGCAGTCATTGCCCTTGGGAGTGTAATCTTATCAAGAAACCGGTTAATTTGCTCCATGGATGCGGTGTTGAGCGGCAGTCTGTGTCGGAGCAAGGTTGTCAAGAGGAGGTTTTGGAGTATTTGGATAGAATTCTTAGATTGGGGTTTGAAGTTGAGTGGGACAAAGATCAGGACCCTTACTTTATTAAGTGTAATGATTGTGAAGCTAACAAAGGTGTTTGTGGGTTCAATTCTTCAGACCCAGATAGGAAATTCATTTGCTATTATACTCGAACTCGATACTCATACCCTAATAGAATCGCGATTCTGTCCTCTGTTTTTGCATTGATGTGCTTGTTATTGGTTATTGCGGTGATGTTGGCTTTTTTCAGGTCCAGATGGTTGAGATCCTTCGCCATTGAAGTTGACCCAACAGCTCAGTTCCTTAGCCGTCATCGTTCACCTAATCTTCTCCCACCTGTTTTTCCTTACGAAGAACTTGAATCCTCAACTAATCGATTCGACCCAAAGAGGAAACTGGGCGACGGTGGATTTGGGTCTGTTTATTTGGGTCAGCTCAACGATGGTCGATTAGTGGCCGTTAAGTATCTCCACAAGCATCACGCCGCCGCCACTGCCTCCTCCGGCAAGGCTTTCTTCACCAAATCGTTCTGTAACGAAATCTTGATTCTTTCTTCGATTAATCACCCAAATCTCGTTAGGTTACATGGGTATTGTAGTGATCCAAGAGGGCTTATTCTAGTTTATGATTATGTTCCAAATGGGACTCTCGCCGATCATCTCCATGGGCCTAAATGCTCGTACCGGAAAGGATCTCTCTCTTGGCAAGTAAGGATTGACATTGCTCTGCAAATCGCCATGGCTATGGAGTATTTGCATTTCTCTGTTGTACCACCGATTGTTCACAGAGACATCACGTCTTCTAATATTTTTGTGGAGAAAGATATGAGAATCAAAGTTGGGGATTTTGGGCTTTCAAGGTTGTTGGTTTTCTCTGATACGACGTCATCTTCATCTGGGTATGTCTGTACCGGTCCTCAGGGGACACCAGGCTACTTGGATCCAGATTACCACCGCTCGTTCCGGTTGACGGAGAAAAGTGATGTGTACAGCTTCGGAGTTGTGTTATTGGAGCTGATTTCTGGTTTGAAAGCGGTGGATCAGAGTCGAGAGAGAAGAGAAATGGCGTTAGCTGATCTGGTAGTGTCGAAGATCCAAATGGGTCAGCTTCATCAGGTGGTGGACTCTGTTTTGGGCGTCGACGGTGAAGTAATCGACGGCGTTGAGGCCATGGCGGAGTTGGCTTTCCGATGCGTTGCGGCTGATAAAGACGACCGCCCTGACGCGAAGGAGATTGTGGAGGAGCTCCGGCGAATACGGAACTGCACACGTGGAGGGGTCCGGTCGTCGATTTCAAATGTAAGTGCTGACGTGGGTAGAAGTTGA 1869 46.33 MPSPSPLFTISAILLFSLLFHVHSFCPPFSSQPRFPFSSVSGHGHPSFQVHCSSPHSLISINGLSFSLLSFNISSTTLLLSPLPLNLTPTPKQSNHSCFSLRSSSIPTRSIDFSGSPFRISDGYCSRLSLLRPCSPPHLPNCSHCPWECNLIKKPVNLLHGCGVERQSVSEQGCQEEVLEYLDRILRLGFEVEWDKDQDPYFIKCNDCEANKGVCGFNSSDPDRKFICYYTRTRYSYPNRIAILSSVFALMCLLLVIAVMLAFFRSRWLRSFAIEVDPTAQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHAAATASSGKAFFTKSFCNEILILSSINHPNLVRLHGYCSDPRGLILVYDYVPNGTLADHLHGPKCSYRKGSLSWQVRIDIALQIAMAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFSDTTSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRERREMALADLVVSKIQMGQLHQVVDSVLGVDGEVIDGVEAMAELAFRCVAADKDDRPDAKEIVEELRRIRNCTRGGVRSSISNVSADVGRS* 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26098077 26099945 - CsaV3_5G032140.1 Csa05g02395 530782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02395 622 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Csa05g02395 622 CDD STKc_IRAK 314 600 - -
Csa05g02395 622 Gene3D Transferase(Phosphotransferase) domain 1 393 614 - -
Csa05g02395 622 Gene3D Phosphorylase Kinase; domain 1 282 392 - -
Csa05g02395 622 SUPERFAMILY Protein kinase-like (PK-like) 288 597 IPR011009 -
Csa05g02395 622 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 18 608 - -
Csa05g02395 622 Pfam Protein kinase domain 310 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g02395 622 ProSiteProfiles Protein kinase domain profile. 308 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g02395 622 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 608 IPR045274 GO:0007166
Csa05g02395 622 ProSitePatterns Tyrosine protein kinases specific active-site signature. 441 453 IPR008266 GO:0004672|GO:0006468
Csa05g02395 622 Pfam Wall-associated receptor kinase C-terminal 171 231 IPR032872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02395 Csa-Chr5:26098077 Csa01g00680 Csa-Chr1:4352931 2.82E-85 dispersed
Csa05g02395 Csa-Chr5:26098077 Csa01g00398 Csa-Chr1:2483778 2.75E-89 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78273 PF00069 Pkinase 3.40E-44 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02395 - - csv:101206111 1201.42