Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02495 ATGGGAACAAAGGTGCAGTATGAAAGTTATTTGCCAGGTTATCACTCAATGAGAGATCTAAATGAAGATTCTCATGGTTGTAGCTGGCCTTTATATTACAGTGAAAAATCATGTCAGAGTGGTCAATACTATAATGGAATTCTGCCAAGAGCTACCTCTGATGCATATCTAGGTTGTGATAGAGATGCTGTGAAGAGGACAATGCTCGAGCATGAAGCCATATTCAAGAACCAGGTTCGTGAGCTGCATCGGTTATATATAAAACAGAGAGAGTTAATGAATGATATTAAAAGATCAGAACAAAGACACCCAATACCGGTGGACATATCATTCTCATCTAGTCCTTTAGCATCTCAAAGTACTCCTGATGGTGCAAGGAAATGGCATCTCCCGAGCTTTCCTCTTGCAATTTCTTCCAGTGGACCATCTGTACCTGGCGTTGAAGATGTAAAATCATCTTTAAGTTCTTTGAAAGAAAACAATAGAAGTGATGGTCTCTTACCATCTCAAAATGGAACTAGTTCGAAAGACTGTGAGGTACTAGAATCTAGACCCTCAAATTCTAGGAGGAAAACTTTTGATCTTCAACTTCCAGCAGACGAGTACATTGATAGTGAAGAGGGGGAGGTATTTCATGATGAAAAAGTGCCTCCCACATTGGGTTGCCATTCAAATGGCAGCAAGAAATTTGAGACTCAGTGTTGTGTGACAGCAAATTTGAATTTGAATCCCGGAGAAAAAAGTGGTGGCCAAAGAGCTGCTTTGGCATCTGACTCATGTGTATGGAACAAATATGGTTTGGCTGACTTAAATGAGCCTGTTCAGGTCGAAGAGGCAAATGGGTCCAATTTTTTTGATCTTCCTAGTGCTCGTGACACCAACAATGGGGAGACTCAAGGTCCCATTGTATCATCTACGAAGCAAGAAAATTTTCTGAGCTCCAGTAATGAAGGTGGACATGCAACAAATAGGAATTTGTATATTGAGAATGGAAATAGAAGAGAGGCATTTCCTAACATCTTTGAAGCAGGACGTAGTAAGGAAAGTGAGAAATCTTTTACTCGTGGTCAGATGGAAAAATTCCATTTATCTTCTAATCCTTTGCAAGTTCCACTTAACAAGTATCATGAACTTCCAGTTTTCTATCTCAATGATAAAAGCAAGGTTCAACAAGATTTGGACAGGCCAGTTAGTGATTTGCAATTATTCAAAAGAAGTTATGAAATGTCCAATGCTGGGGATCCTGGTTATGTTTTAGCTTCTCAGACATCCCATGCATATCAAATTGCTCCTTCTTTGAATGTTGGCAAGTCGTGGGCTCACTCCGGTTCATCTTGGGAAAAGTCAAATGGCAACAGCTCCCAGAAGACATCAGGTCATACACAGCCGTGCTTCAAATCTGCTGCTGTTCACAAGAGTTTTCCTTCATCAACTCAGAACAATGGAATTTTTGGAGATAGATGTCATTTGAGTAGTGACTCTAGATCAAATCCTGGGTCTGGTTGCGAAAATCCTAACCGAAATGGATTCTATTTCGGGTCTACCTCTGGTTCCAACGGTGGAGTTTTCTCCTCTACTATAAGCCGTGATCATGGGGCAAACTATTACAAGGGCTCTGGTTGTGTCAGCACGAATTCTCCAAAAGATATTAACTTGAATGTAGTGCTCCCAAAAAGTTTATCAAATGAGGCAGGTCAACAACCAAACTATCGGACTAGAGAGTCAGACCAAAACAATGAGGACCATCATAATGTATTACCATGGTCAAGGGCTGTACCTGCTGCTAGTAAGAATGAAACAATCAATTCAAGAAGATTCTCTGTGACTGGAGAGCTTAATTTTGCACTCTCTCCGATGAAACAATTTTCTGATAGAAACGAAACTGAAAATGGCAGTAAAGTTATATGTTATCCGAACATTGAGTCTAATTCACATTGTAGTAACAATGAGCCCAGAATGTCGGAACACGGTGAATGCCAGAGTAGCCGAAAACTTCTTGGGTTTCCCATTTTTGAAGGGCCACACATTTCTAAGAATGAGTCGTTTTCTCTTACATCCCCATCAGCATCTCTTCCTAATCCATCTGAGAATGAAATGGAAGGTAACCGGAAAACTAGAGTACTTGATATCAATTTGCCTTGTGATCCTTCAGTTTTTGAGTCGGACAATGCTACGAACGGAGCTCTGGCTGTAGAGAATGGAAAGGACACAAAGGTCTCTACTGTGAGAGTTGATATTGATTTGAACTCATGTGTCAGTGATGAAGAACCATCTATTAGACCCTTACCTCTGGCTTCTTCGAGTGGCAAGGAAAGGGTTGTGGTAGAGATAGATTTAGAAGCCCCGGCAATGCCCGAGACTGAAGACGACATAATTGTAGAAGAAGAATCTTTAGAAAAACAGCATGAACAACAACCACAATCCCTTCAGCACAAGGCTGTTGATATTCAGGATGATCTTATGTCTTTAGCAGCAGAGGCAATACTTGCCATCTCTTCTTGTGGTTATTCCGGTCTTTTGGATGATAGTGTTGTTAGCAATGGCTTGGAAGATTCTTCAAGCGACACCCTAAATTGGTTTGCCGAGATAGTTTCCACACATGGAGATGATGAACAAACCAAGTCTGACACTGTATTGAGATCCAAAGAAGGCAAGGAGACTGAGGAATCCTCTTTGAGAGGGATTGATTACTTCGAATACATGACTTTGAGGCAGGCGGAGGTCGATGAAGAACACTACATGCCTAAGCCTCTGGTTCCAGAAAATATGGAAATTGAAGATACTGGAACCAATTTGTTGCAAAATCGGCCCCGAAAGGGCCAGACGAGGAGAGGTCGGCAGAGAAGGGACTTCCAAAAGGACATCCTTCCAGGCCTTTCTTCTCTATCAAGGCATGAGGTTACAGAAGATCTTCAGACATTTGGTGGCCTAATGCGAGCAACGGGCCACTCTTGGCATTCTGGAGTTACGAGGAGGAACTCTACTAGAAACGGTTGTGGTAGGGGAAGACGAAGATCAGTAACCAGTCCCCCGCCTCCTGTGCAATCAGCTTGTAATCAGCTGATACAGCAACTAAGTAACATTGAAATGGGTCTAGAAGATGGAAGCCTGACTGGTTGGGGCAAGACAACTAGAAGGCCCCGTCGGCAGAGATGCCCGGCCGGTAACCCTCCGGCTGTTCCTTTAACTTAA 3192 42.32 MGTKVQYESYLPGYHSMRDLNEDSHGCSWPLYYSEKSCQSGQYYNGILPRATSDAYLGCDRDAVKRTMLEHEAIFKNQVRELHRLYIKQRELMNDIKRSEQRHPIPVDISFSSSPLASQSTPDGARKWHLPSFPLAISSSGPSVPGVEDVKSSLSSLKENNRSDGLLPSQNGTSSKDCEVLESRPSNSRRKTFDLQLPADEYIDSEEGEVFHDEKVPPTLGCHSNGSKKFETQCCVTANLNLNPGEKSGGQRAALASDSCVWNKYGLADLNEPVQVEEANGSNFFDLPSARDTNNGETQGPIVSSTKQENFLSSSNEGGHATNRNLYIENGNRREAFPNIFEAGRSKESEKSFTRGQMEKFHLSSNPLQVPLNKYHELPVFYLNDKSKVQQDLDRPVSDLQLFKRSYEMSNAGDPGYVLASQTSHAYQIAPSLNVGKSWAHSGSSWEKSNGNSSQKTSGHTQPCFKSAAVHKSFPSSTQNNGIFGDRCHLSSDSRSNPGSGCENPNRNGFYFGSTSGSNGGVFSSTISRDHGANYYKGSGCVSTNSPKDINLNVVLPKSLSNEAGQQPNYRTRESDQNNEDHHNVLPWSRAVPAASKNETINSRRFSVTGELNFALSPMKQFSDRNETENGSKVICYPNIESNSHCSNNEPRMSEHGECQSSRKLLGFPIFEGPHISKNESFSLTSPSASLPNPSENEMEGNRKTRVLDINLPCDPSVFESDNATNGALAVENGKDTKVSTVRVDIDLNSCVSDEEPSIRPLPLASSSGKERVVVEIDLEAPAMPETEDDIIVEEESLEKQHEQQPQSLQHKAVDIQDDLMSLAAEAILAISSCGYSGLLDDSVVSNGLEDSSSDTLNWFAEIVSTHGDDEQTKSDTVLRSKEGKETEESSLRGIDYFEYMTLRQAEVDEEHYMPKPLVPENMEIEDTGTNLLQNRPRKGQTRRGRQRRDFQKDILPGLSSLSRHEVTEDLQTFGGLMRATGHSWHSGVTRRNSTRNGCGRGRRRSVTSPPPPVQSACNQLIQQLSNIEMGLEDGSLTGWGKTTRRPRRQRCPAGNPPAVPLT* 1064
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26624508 26632004 + CsaV3_5G033140.1 Csa05g02495 530882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02495 1063 MobiDBLite consensus disorder prediction 679 701 - -
Csa05g02495 1063 PANTHER - 1 1062 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 145 181 - -
Csa05g02495 1063 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 1 1062 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 140 187 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 984 1016 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 1033 1063 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 986 1002 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 679 698 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 559 583 - -
Csa05g02495 1063 MobiDBLite consensus disorder prediction 559 573 - -
Csa05g02495 1063 Pfam Plant protein of unknown function (DUF863) 141 1053 IPR008581 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02495 Csa-Chr5:26624508 Csa06g02057 Csa-Chr6:18401675 0 dispersed
Csa06g03006 Csa-Chr6:25907318 Csa05g02495 Csa-Chr5:26624508 1.32E-06 dispersed
Csa01g02166 Csa-Chr1:18794150 Csa05g02495 Csa-Chr5:26624508 6.00E-08 transposed
Csa05g00401 Csa-Chr5:2612619 Csa05g02495 Csa-Chr5:26624508 4.80E-07 transposed
Csa01g00576 Csa-Chr1:3696754 Csa05g02495 Csa-Chr5:26624508 4.08E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02495 - - csv:105435576 2122.44