Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02510 ATGTATATGGTGGAGAGTAAAGCAGGTGCAATAGCATGTATGATGTTTTCGCTCTTTTTTCTTGGAACCTTCCCTGCTCTATTGACACTTCTCGAACGGCGGGGGCGTCTTCCTCAGCATACTTACCTTGATTACTCTATAACAAGTTTTTTAGCTGCGGTTGTTTTTGCTCTAACACTTGGTGAGATGGGAAATAGCTCGCAAGACAGTCCAAATTTTATCCAACAGCTTTTTCAGGATAACTTACCTTCTGTTATGTTTGCAATGGCTGGTGGCGTGACACTGAGTATCGGAAATCTGTTGGCACAATATGCTTGGGCATTTGTTGGTTTATCTGTGACAAAAGTGATTTCTTGTAGTATAGTGGTAGTTATAGGCACGACTGTGAACTACTTTCTTGATGACAAGATTAATAAAGCCGAGATTCTTTTCCCTGGGGTTGCTTGCTTCTTGATTGCTGCATTTCTTGGCTCTATTGTTCACTCATCCAACATGGCCGATAACGATCTAAAGTTGAAAAGTTCACCCGCTAATTTTGAAGAGCCAAATGAAACCAAAATCTCTCTAATTTCAAACATGGTCGAATCAACGAACCTGGAAAGTGCTGCTTACTCTTCGCGGAAGGCAAAGGCTGGAACTGCTGACTTTCTTGTTCAGCTTGAAAATAGAAGATCCATCAAGGTGTTTGGTAAGAGCACACTAATTGGATTGTGCTTAACTTTCTTTTCTGCTGTTTCCATTTCTCTCTTCTCACCAGCATTCAATTTGGCCACAAACGATCAATGGCACACTCTAGATGATGATGTCCCACATTTGACCGTCTATACCGCATTTTTCTACCTTTCGGTCTCTTGTTTTTTCATAGCTGTCATTCTCAATGTTGTCTTCCTTTACCACCCTATGCTTAATTTGCCCAAGTCAACAATAAAGGCATATCTGAAGGACTGGAATGGTAGAGGATGGGCCTTGTTGGCTGGATTCTTGTGTGGGTTTGGCAATGGTTTGGAGTTTATGGGCGGTCAAGCAGCTGGATATGCAGCGTCAGCTTCTGTTCAGGGACTTCCACTCGTGAGCACGTTTTGGGGGATTGTTCTGTTTGGAGAGTACCATAAATCATCAAGGAAAACGTACACTCTACTTGTCATCACCTTGTTCATGTTTACAGTGGCAGTTTGTGTCCTAATGGCTTCATCCGGAGGTCGTCGGCATCAGACTAGGATTGCAACATTTTGA 1233 42.58 MYMVESKAGAIACMMFSLFFLGTFPALLTLLERRGRLPQHTYLDYSITSFLAAVVFALTLGEMGNSSQDSPNFIQQLFQDNLPSVMFAMAGGVTLSIGNLLAQYAWAFVGLSVTKVISCSIVVVIGTTVNYFLDDKINKAEILFPGVACFLIAAFLGSIVHSSNMADNDLKLKSSPANFEEPNETKISLISNMVESTNLESAAYSSRKAKAGTADFLVQLENRRSIKVFGKSTLIGLCLTFFSAVSISLFSPAFNLATNDQWHTLDDDVPHLTVYTAFFYLSVSCFFIAVILNVVFLYHPMLNLPKSTIKAYLKDWNGRGWALLAGFLCGFGNGLEFMGGQAAGYAASASVQGLPLVSTFWGIVLFGEYHKSSRKTYTLLVITLFMFTVAVCVLMASSGGRRHQTRIATF* 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26696560 26699585 + CsaV3_5G033290.1 Csa05g02510 530897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02510 410 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 401 IPR030189 GO:0016021|GO:0022857|GO:0071705
Csa05g02510 410 Pfam Ureide permease 41 397 IPR009834 GO:0016021|GO:0071705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01494 Csa-Chr5:17328767 Csa05g02510 Csa-Chr5:26696560 5.25E-14 dispersed
Csa05g02510 Csa-Chr5:26696560 Csa05g02512 Csa-Chr5:26705627 0 dispersed
Csa05g02510 Csa-Chr5:26696560 Csa05g02511 Csa-Chr5:26700197 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02510 - - csv:101220808 805.053