Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02515 ATGGCAGCGAGGGGTAGTCGGGAAAGAACTTCACAAACGACAGGACAACTGGGATTTGGGTCTGCATCGTCCATAGATTTTTTGGAAATATCAGATCTCGCTCAAGTTGGAGCAAATGTTAACCGACCGGAAGCAGACACGATTTGTTTGGCAAATCCTGGGCGTGGGATTTACCAGCTTCAGTTTAAAGATGATAATAGCGATGTTTCCAGCGTCTGTTCTTCCAAATCAGAGAAGAGTTGCGGTTCTCAAGGTCCCACATCTGTATCCCAAGTGTCAGGTTTTACACATGAGTCTGGTGGAAATGTTTTGTCCCCAACTCAATCCCCTTCTCTCCAAACAATGGATCGTGCGGGAGGATATGGTGAATCATATGATCCGTTTAGAATCCCATCTGCAGTTTTCCAAAGAAGTAGTTCTGTTACTCCACTGGAATGGAGTATTGCTTCAAATGAGTCATTGTTTAGCATTCAGGTTGGAAACAATAGCTTCTCCAGAGATCAAGTGTTGATGTTGAATGAGTTAGGTAAGTCGGGTGAGTTAACGAAATCTGGCAAGTTGAAAAAAGCAGAAGATTCGTTTGTGTTTAGCTCACCACCTGCAGTTATCATGTCAAGAGAAGCTGAAATGAAGAGTGCTGAATATGAAGCGGATCCTAAAATGGCAGATACCATAGAATATAACATAAAGGATAAAAGTGGATCGATTACAGACGATGATCTTAGTGACAGAAACCTACCACCTCCTGCAGTATCATGGAATTCCTCTACCAAATCTCGGCACTCTGATAGAAGTCTAAGGAGCTCAGATTCATTCGCTTTCCCCATGCGTTCTGCTACTGTTTGTGGCCACGTTGCTACCCTACATGGTCAAACTGTTGTTGCTGGAACTGTAGCAGGACGTTCAGCTATTGTTGGAACTATAGCCGAAGAGGTGGTCACATTCAGACCTCTAACATTTTGGCCGATGAAGAGGCGCAGGCTGGATCCATGCCTAATGATGCTAAATTTCAAGGCACTCCAGTCTCTTCAAAATCAAAACCGAAGTGTTGGTTCTCCTGCTGTTCATGTAGTTGTTCATTTTCTTCTTGTTTCAAATGGATTTTTTGTTGGTGTTTTTATTGTCCCAAATGGAGGTGTTCGTATTCTTCTTGTTATAAGCGGAGTTGTTGTTCGTGTTCTTCTTGTTGCAAATGGAGATGTTCATGTTCTTCTTGTTTCAAGTGGAACTGCAGTTCGTGTTCTTGTCCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCAAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCAAAATGGAGTTGCAGTTCATGTTGTTCTTGTCCCAAATGGAGTTGCAGTTCATGTTCTTGTTCCAAATGGAGTTGCAGTTCATGTTTTTCTTGTTCTTCTTGTTCCAAAAGGAGTTGCAGTTCATGTTTTTCTTGTTCCAAGTGGAGTTGTGGTTCGTGTTCTTCTTGTTGCAAATGGGATTCATGCACATGTTCATCTTGTTGGACATGCAGCTGCTGTAGTAATTGTCATTTTTGCGATTGTTGCCATTTTCGTCCTCGCTGTTGCTTTCGACCTCGCTGTCATATTTACCCTTCTTGTCATTTTTGCAGTTGTTAAATGGACGTCGTCCCAGAAAGGACATCGTCACCTGATTTTTTATACTAATCCTTTAGGTGTTTAG 1731 42.23 MAARGSRERTSQTTGQLGFGSASSIDFLEISDLAQVGANVNRPEADTICLANPGRGIYQLQFKDDNSDVSSVCSSKSEKSCGSQGPTSVSQVSGFTHESGGNVLSPTQSPSLQTMDRAGGYGESYDPFRIPSAVFQRSSSVTPLEWSIASNESLFSIQVGNNSFSRDQVLMLNELGKSGELTKSGKLKKAEDSFVFSSPPAVIMSREAEMKSAEYEADPKMADTIEYNIKDKSGSITDDDLSDRNLPPPAVSWNSSTKSRHSDRSLRSSDSFAFPMRSATVCGHVATLHGQTVVAGTVAGRSAIVGTIAEEVVTFRPLTFWPMKRRRLDPCLMMLNFKALQSLQNQNRSVGSPAVHVVVHFLLVSNGFFVGVFIVPNGGVRILLVISGVVVRVLLVANGDVHVLLVSSGTAVRVLVPNGVAVHVVLVPNGVAVHVVLVQNGVAVHVVLVQNGVAVHVVLVPNGVAVHVLVPNGVAVHVFLVLLVPKGVAVHVFLVPSGVVVRVLLVANGIHAHVHLVGHAAAVVIVIFAIVAIFVLAVAFDLAVIFTLLVIFAVVKWTSSQKGHRHLIFYTNPLGV* 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26713734 26716155 + CsaV3_5G033340.1 Csa05g02515 530902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02515 576 MobiDBLite consensus disorder prediction 236 265 - -
Csa05g02515 576 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 21 282 - -
Csa05g02515 576 PANTHER - 21 282 - -
Csa05g02515 576 MobiDBLite consensus disorder prediction 73 115 - -
Csa05g02515 576 MobiDBLite consensus disorder prediction 73 120 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00296 Csa-Chr1:1846663 Csa05g02515 Csa-Chr5:26713734 1.65E-18 wgd
Csa05g02515 Csa-Chr5:26713734 Csa05g03032 Csa-Chr5:30505616 4.14E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02515 - - cmo:103489558 453.366