Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02517 ATGTGTGGAATCGCTTTGATCGTTTCGGGCATTCGCCTTCATTTATCTTCTCTACATGTAGACGCCACATCCCCGTCTCCTTCTCCAGTTCACGAGCAACTCGAGTTTTCAATTGATGATCTTAAAGCAGTATTACGGAGAAGAGGGCCCGATAGCTTAGGGGGAGTGAAGGTTTTTTTCTCTTTAAAATCTTCTAATCCCAGTGGAGAAGAGCAGCTTGAGTGTTTCATTGAAAGGGTTGATGATGGCGTAGCATTCCAAAATCAAAATGATCAATACGAGATGGAAAATGGATCTATTCTCCAATCAGAGAACGGTTGCAGTAATCCCATCTCTGGTGCGGAGCTTTATTTACTTGGGGCCACGTTACAACTTAGAGGTGTTAACTCTATTGTTCAGCCGCTGATGGATGCTTCCCGCAATATTCTTGTTTACAATGGTGAAATATTTGGAGGACTACATGTTGAGTGTCATGAAAACGATGCCGAAAGTCTTATGCTAGCACTTTGGAATTGTTGCTCATGTAATTTTAGTTTAGATATGAACACATGTGAAGATGAATTTAGGAGAGAAAGAACTATTGTGGATATTCTTTCAAAGATCCAAGGGCCATGGTCAATCGTCTACTGGCAGGATAGTGCAAAAACTTTGTGGTTTGGTCGGGATGCCTTTGGTAGGCGAAGTCTTCTTGTTCACTGGCCAACAGTGGAGGATTCTCGGTTTCTGTTGTCGTCTGTATCACCAGCTTCTTCCATGTTTCAAGACTCTGGGCTTGAAGTTGACAGTGGTACTTGTGAAGTGAGCTTCTGGGAAGAACTACCATGTGGGATTTACAGTGTCTCTTTTGATGCTCAGAAAACTGATGGTTGCGTGGTTGGTGAAGTCAAAAGGCATGAATGGACCAATGAGTTACTGAAAGAGCTTGTTGAGTGGAAAAGAACTCGTATTGTACCTGAACATGGAGACATCTCCACTCCATATCACAAGGATTGTTTGTCACAACATGAAAGCCATTCTACATGTTTACATAACTTGCAATCAGCATCGGGGAATTTCCAAGCTCCTGTCTCAACACCTGCAGAGATTCTACTGGATGCTCTAAGGAAGTCTCTAATCCGGCGGACTTCACTTTATACAATTTTCCAGGGTACTATGTCTGCTTCCAGAAAAGCAGAACTTGGTCCAGTGGCCATTCTTTTTTCTGGTGGGTTGGATTCTATGATTCTAGCAGCATTACTGGATGAATGTCTCGATCCTTGTTATGAGGTGGATCTTCTTAATGTCAGCTTTGATGGATGTTCTGCACCTGATCGCATCTCTGCGAAGGCTGGTGTTAAGGAACTGAGTAGAATTGCCCCTCTAAGAAGGTGGAAGCTGGTTGAGATTGATGCTGATATGTCAGATTTGACCTCTGAAACCAAGCACGTCATGTCTCTAATAAATCCTGCAAATACATACATGGACCTAAATATTGGAATAGCTTTGTGGCTGGCCTCTGGTGGCAATGGTTGGATTTATGAATCAGCTGATGAGGATGAGAAGTTCCATCAACGTGTAAAATACAAGTCCGAGGCCAAGATTCTCCTTGTTGGTTCTGGTGCCGATGAGCAATGTGCTGGCTATGGCAGGCATCGAACAAAATATAGACAAGGGGGTTGGAATCTTTTAAATGAGGAAATGAAGTTGGATATCCAGAGAATCTGGAAGAGAAATCTAGGGAGAGATGACAGATGTATTGCAGATAATGGGAAGGAGGCTAGATTTCCCTTTTTGGATGAAGACGTTATACGTACATTGCTAGCATTTCCTCTATGGGAGGTTACTGACCTTGAGAAACCTGCTGGAACCGGTGACAAGAAGATACTTAGGGAGGTTGCAAAATTACTTGGCCTGCACGAAGCAGGGGTTCTACCTAAAAGAGCAATACAGTTTGGCTCAAGGATTGCAAGGGAATCAAACCGCAAGAACTTCGGAAGCAACCGGGCTGCTAATCAGGCCTCCGCCGGAAGTGTGAAGTTCAACAAACAATCTGTACTTCGGTGA 2043 43.51 MCGIALIVSGIRLHLSSLHVDATSPSPSPVHEQLEFSIDDLKAVLRRRGPDSLGGVKVFFSLKSSNPSGEEQLECFIERVDDGVAFQNQNDQYEMENGSILQSENGCSNPISGAELYLLGATLQLRGVNSIVQPLMDASRNILVYNGEIFGGLHVECHENDAESLMLALWNCCSCNFSLDMNTCEDEFRRERTIVDILSKIQGPWSIVYWQDSAKTLWFGRDAFGRRSLLVHWPTVEDSRFLLSSVSPASSMFQDSGLEVDSGTCEVSFWEELPCGIYSVSFDAQKTDGCVVGEVKRHEWTNELLKELVEWKRTRIVPEHGDISTPYHKDCLSQHESHSTCLHNLQSASGNFQAPVSTPAEILLDALRKSLIRRTSLYTIFQGTMSASRKAELGPVAILFSGGLDSMILAALLDECLDPCYEVDLLNVSFDGCSAPDRISAKAGVKELSRIAPLRRWKLVEIDADMSDLTSETKHVMSLINPANTYMDLNIGIALWLASGGNGWIYESADEDEKFHQRVKYKSEAKILLVGSGADEQCAGYGRHRTKYRQGGWNLLNEEMKLDIQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRTLLAFPLWEVTDLEKPAGTGDKKILREVAKLLGLHEAGVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVKFNKQSVLR* 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26725050 26730675 + CsaV3_5G033360.1 Csa05g02517 530904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02517 680 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 42 264 IPR029055 -
Csa05g02517 680 Gene3D HUPs 357 677 IPR014729 -
Csa05g02517 680 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 28 267 IPR029055 -
Csa05g02517 680 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 390 650 - -
Csa05g02517 680 CDD Asn_Synthase_B_C 394 645 IPR001962 GO:0004066|GO:0006529
Csa05g02517 680 Pfam Asparagine synthase 517 629 IPR001962 GO:0004066|GO:0006529
Csa05g02517 680 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 665 - -
Csa05g02517 680 Pfam Glutamine amidotransferase domain 132 245 IPR017932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02517 - - csv:101211806 1376.3