Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02519 ATGTCCTTCCTGCCACCTCCCCATCAATCAACCGACTACGCAAACACAATGCTTCGTAACAAGATTGCTCATACTTTACTCCGTCGATCTCCAATCGCCGCCGTTTCCTCTCCACTCTCCTCCCTCGGAGCACCCTCGTCCACAGTCTTTGCCTCTGAACCAACGCCTTCTCAAACTACTTGCTCCTCTTTCTCCTGTCGCCACCACGCGTTCCCCTTTTCCCTGCGGTTGTTCAATACCAATTCCTCTAAACACTTTCGAGATGAAGTCAAAGAACAAAATCCTCCTCAGTATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGATGGTGGTGGTGTCGTTTTACAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTGTATTCTTTCAAGGTCACTCCACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAATTTGGTTGTCCCAACCTGGAGGAGCTTGATAGTTATAGCAAAGAGTACAAAAAGAGATTAGATGAAACTGGAGCACTTGGAAATATTCCCGATGATTTAGCCCTGGAGGTATCGTCTCCAGGTGCAGAGAGATTACTGAAGATTCCAGATGATCTGCTTAGATTTAAAGCCACACCAATGCGAGTTTCTTACATTGAAGATGTAGACTCGAGAGGCTCTGAAAATGATGGAGTTTTTATGTTGGATCATTTAGAATTGGAATCTGAAAGTTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGCAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTAAATGCTGA 948 45.25 MSFLPPPHQSTDYANTMLRNKIAHTLLRRSPIAAVSSPLSSLGAPSSTVFASEPTPSQTTCSSFSCRHHAFPFSLRLFNTNSSKHFRDEVKEQNPPQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGYIYVRLDKLSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKIPDDLLRFKATPMRVSYIEDVDSRGSENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLKC* 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26738302 26744983 + CsaV3_5G033380.1 Csa05g02519 530906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02519 315 PANTHER OSJNBA0006B20.18 PROTEIN 17 314 - -
Csa05g02519 315 MobiDBLite consensus disorder prediction 86 104 - -
Csa05g02519 315 MobiDBLite consensus disorder prediction 105 122 - -
Csa05g02519 315 MobiDBLite consensus disorder prediction 86 127 - -
Csa05g02519 315 PANTHER OS01G0594650 PROTEIN 17 314 - -
Csa05g02519 315 Hamap Ribosome maturation factor RimP [rimP]. 139 315 IPR003728 GO:0042274
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02519 Csa-Chr5:26738302 Csa06g01908 Csa-Chr6:17196413 2.70E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02519 - - csv:101211568 576.244