Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02547 | ATGGTAATCTCAAATAAAGTTTATGGAGTTGTAATGATGATTGTGTTCTGTGGTTTGTTTGTTGTGAGCTATAGTTTGTTTGAAACAGGGGAGACCCGGTTGACATTGGATTACTATACCAGAACTTGTCCCAATGTGTTGCAGATTGTGAGGAAAGAAATGGAGTGTGCTGTTCTTTCTGAACCACGTAATGCAGCTTTTGTTGTTCGATTGCACTTTCATGATTGTTTCGTTCAGGGGTGCGACGGATCGGTTTTACTGGACGACACAATAACATTACAGGGAGAAAAAAAAGCTTCCAACAACATACACTCTCTCAAAGGCTTTAGAATCATTGATAGGATAAAGAACAGCATTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCTGATATACTCACTATTGCAGCCAGGGATGCTGTTATTCTGGTGGGTGGGCCTTACTGGGATGTTCCACTAGGAAGAAAGGATTCGACGAGTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTCAGCATCATCTCGAAGTTTCTATATCAGGGTCTCTCGGTTACTGACATGGTAGCTCTATCAGGAGCGCACACGATCGGAATGGCGAGGTGCGAGAATTTCAGACAGAGAATTTACGGGGATTTCGACGCAACTTCAGATCCAAACAACCCGATTTCGGGGTCGTACATCGAGAAGTTGAGGTCAATTTGTCCATTAGTTGGTAAAACAGGAGAGGACAACATAACAGCAATGGACAATATGACACCAGAGCTATTTGACAACTCTTATTTCCATATTTTGATGAGAGGAGAAGGGGTTTTGAATTCAGATCAAGAATTGTATTCAAGCCTTTTGGGCATAGAAACTAAGGCATTGGTGAAGAAATATGCTGCAGATCCAATTGCTTTCTTTCAGCAATTCTCTGATTCTATGGTGAAATTGGGAAATATTACCTATTCTGATAGCTTTGTCAATGGGGAAGTTAGGAAAAACTGCAGGTTTATTAACACATGA | 1026 | 41.33 | MVISNKVYGVVMMIVFCGLFVVSYSLFETGETRLTLDYYTRTCPNVLQIVRKEMECAVLSEPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASNNIHSLKGFRIIDRIKNSIESECPGIVSCADILTIAARDAVILVGGPYWDVPLGRKDSTSASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRQRIYGDFDATSDPNNPISGSYIEKLRSICPLVGKTGEDNITAMDNMTPELFDNSYFHILMRGEGVLNSDQELYSSLLGIETKALVKKYAADPIAFFQQFSDSMVKLGNITYSDSFVNGEVRKNCRFINT* | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 26900165 | 26903839 | + | CsaV3_5G033660.1 | Csa05g02547 | 530934 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02547 | 341 | CDD | secretory_peroxidase | 34 | 339 | IPR033905 | GO:0004601|GO:0042744 | |
Csa05g02547 | 341 | Gene3D | Peroxidase, domain 2 | 171 | 318 | - | - | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 43 | 62 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 67 | 87 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 107 | 120 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 126 | 136 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 145 | 160 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 192 | 204 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 254 | 269 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 270 | 287 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Plant peroxidase signature | 313 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PANTHER | PEROXIDASE 72-RELATED | 25 | 339 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | Pfam | Peroxidase | 50 | 303 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | ProSiteProfiles | Plant heme peroxidase family profile. | 33 | 340 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | SUPERFAMILY | Heme-dependent peroxidases | 34 | 340 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Haem peroxidase superfamily signature | 65 | 79 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Haem peroxidase superfamily signature | 127 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Haem peroxidase superfamily signature | 145 | 157 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Haem peroxidase superfamily signature | 193 | 208 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | PRINTS | Haem peroxidase superfamily signature | 256 | 271 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa05g02547 | 341 | ProSitePatterns | Peroxidases active site signature. | 65 | 76 | IPR019794 | GO:0004601 | |
Csa05g02547 | 341 | PANTHER | PEROXIDASE 11 | 25 | 339 | - | - | |
Csa05g02547 | 341 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 193 | 203 | IPR019793 | - | |
Csa05g02547 | 341 | Gene3D | - | 38 | 340 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g02547 | Csa-Chr5:26900165 | Csa06g00217 | Csa-Chr6:1493533 | 1.59E-99 | dispersed | |
Csa05g02547 | Csa-Chr5:26900165 | Csa06g03285 | Csa-Chr6:27565675 | 3.83E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02547 | K00430 | - | csv:101216779 | 683.715 |