Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02547 ATGGTAATCTCAAATAAAGTTTATGGAGTTGTAATGATGATTGTGTTCTGTGGTTTGTTTGTTGTGAGCTATAGTTTGTTTGAAACAGGGGAGACCCGGTTGACATTGGATTACTATACCAGAACTTGTCCCAATGTGTTGCAGATTGTGAGGAAAGAAATGGAGTGTGCTGTTCTTTCTGAACCACGTAATGCAGCTTTTGTTGTTCGATTGCACTTTCATGATTGTTTCGTTCAGGGGTGCGACGGATCGGTTTTACTGGACGACACAATAACATTACAGGGAGAAAAAAAAGCTTCCAACAACATACACTCTCTCAAAGGCTTTAGAATCATTGATAGGATAAAGAACAGCATTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCTGATATACTCACTATTGCAGCCAGGGATGCTGTTATTCTGGTGGGTGGGCCTTACTGGGATGTTCCACTAGGAAGAAAGGATTCGACGAGTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTCAGCATCATCTCGAAGTTTCTATATCAGGGTCTCTCGGTTACTGACATGGTAGCTCTATCAGGAGCGCACACGATCGGAATGGCGAGGTGCGAGAATTTCAGACAGAGAATTTACGGGGATTTCGACGCAACTTCAGATCCAAACAACCCGATTTCGGGGTCGTACATCGAGAAGTTGAGGTCAATTTGTCCATTAGTTGGTAAAACAGGAGAGGACAACATAACAGCAATGGACAATATGACACCAGAGCTATTTGACAACTCTTATTTCCATATTTTGATGAGAGGAGAAGGGGTTTTGAATTCAGATCAAGAATTGTATTCAAGCCTTTTGGGCATAGAAACTAAGGCATTGGTGAAGAAATATGCTGCAGATCCAATTGCTTTCTTTCAGCAATTCTCTGATTCTATGGTGAAATTGGGAAATATTACCTATTCTGATAGCTTTGTCAATGGGGAAGTTAGGAAAAACTGCAGGTTTATTAACACATGA 1026 41.33 MVISNKVYGVVMMIVFCGLFVVSYSLFETGETRLTLDYYTRTCPNVLQIVRKEMECAVLSEPRNAAFVVRLHFHDCFVQGCDGSVLLDDTITLQGEKKASNNIHSLKGFRIIDRIKNSIESECPGIVSCADILTIAARDAVILVGGPYWDVPLGRKDSTSASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRQRIYGDFDATSDPNNPISGSYIEKLRSICPLVGKTGEDNITAMDNMTPELFDNSYFHILMRGEGVLNSDQELYSSLLGIETKALVKKYAADPIAFFQQFSDSMVKLGNITYSDSFVNGEVRKNCRFINT* 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26900165 26903839 + CsaV3_5G033660.1 Csa05g02547 530934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02547 341 CDD secretory_peroxidase 34 339 IPR033905 GO:0004601|GO:0042744
Csa05g02547 341 Gene3D Peroxidase, domain 2 171 318 - -
Csa05g02547 341 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PANTHER PEROXIDASE 72-RELATED 25 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 Pfam Peroxidase 50 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 ProSiteProfiles Plant heme peroxidase family profile. 33 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 SUPERFAMILY Heme-dependent peroxidases 34 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa05g02547 341 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Csa05g02547 341 PANTHER PEROXIDASE 11 25 339 - -
Csa05g02547 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Csa05g02547 341 Gene3D - 38 340 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02547 Csa-Chr5:26900165 Csa06g00217 Csa-Chr6:1493533 1.59E-99 dispersed
Csa05g02547 Csa-Chr5:26900165 Csa06g03285 Csa-Chr6:27565675 3.83E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02547 K00430 - csv:101216779 683.715