Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02564 ATGCCAACTGTTCCAAAGTCCAACCCGTCAACGAAATGTAAGATGAAACGTGGCAAAATCCTGATGGTTCCTTCACGAAGCCACCATACCAACTCCCCTCCCGATCTTCTCTCTTACTCTCTCTCATTCCCCGATCTTCATTTCTCCGGCTGTATCTACAATTTTGACCGGCCGGATCTCCGTGCCGATGCCCAACTAACAACGGAAAGACATTCCTTCCTTCTCTCCTCCGTTTCACGTTCCTCGGCTGCAAGGATGCCGTCGCCTTCGATCCTACCTATCACCCAGCCCCCTTCTTCCTCTCCATTTTCCTCTGGGGGCTCCGTCACCAATTCCATTATGGCAACTACATCTACTGCCATAGACATTATGTTGCTTAAAGAAGACGACGAACATAGGACTGGACTTCTTGTTTCTCCATTGTTCGATGACGATAGGTCGATAGGTCATAAGCCCCTTCTTCCTAGGACTTCCAGCTATGCCTCCTCCACATCAACTTCCTCTTCCGGCAGCACTATGTACAAGCAGAAGCGGAGGCGAGTCAAGAGTGAAGAATTTTTATCTTTTCTCTCCGGTGACGGCCGCCACCAGACTTTTGATCATGATGTGGAGAATGCCGATGTTGAGAGAGCTGAAAGATTTCTACTGACCCGTTTGGGTTTGAAACTCTCAAAATATATTCGGGTAGCATTTAGATGGATTGCAAGGTTTCTGGCACTTGGTTGCTATTCATTTTTTCTTCTTCCAGGTTTTCTTCAAGTTGGTTATTATTATTTCTCTTCCAGTCAGATACGCAGAAGTATACCTTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGCCCAAAACCAGTTGTTGCTTTCATCACTGGCGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGGCAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTGATGATGCCTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGAGCACATATAGCTGCCTGCACGCTTTTGGAGCATGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCTCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATTTGGTAGATTACTTTCACTCTCGAGGTCTATCTCGTTCTCTGTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAGGTAATGATCTTGGAAGAACCCAACATAGGAGCGGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAGACTTTTGCCGAGACTCTTCAAAGCGTTGGAGTGAAAACCGAAACATTTTTCTACGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCATTGAGGGGTGGGAGAGATCAAATGTTTGAAGATCTTGTTGGTATCATCCATGCCAATGACGCGGAAGCGCTGGCAAAAGATGCAGTAGCACCTCCAAGAAGACGATTTGTACCCGAGATCATGTTGATGTTAGCTCGTAGTGTTAGCCCCTTCTAA 1695 44.31 MPTVPKSNPSTKCKMKRGKILMVPSRSHHTNSPPDLLSYSLSFPDLHFSGCIYNFDRPDLRADAQLTTERHSFLLSSVSRSSAARMPSPSILPITQPPSSSPFSSGGSVTNSIMATTSTAIDIMLLKEDDEHRTGLLVSPLFDDDRSIGHKPLLPRTSSYASSTSTSSSGSTMYKQKRRRVKSEEFLSFLSGDGRHQTFDHDVENADVERAERFLLTRLGLKLSKYIRVAFRWIARFLALGCYSFFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGAAVSILPPIILFHGTADYSIPSDASKTFAETLQSVGVKTETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVGIIHANDAEALAKDAVAPPRRRFVPEIMLMLARSVSPF* 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27018138 27024067 + CsaV3_5G033830.1 Csa05g02564 530951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02564 564 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 194 554 - -
Csa05g02564 564 Pfam BD-FAE 278 488 - -
Csa05g02564 564 MobiDBLite consensus disorder prediction 84 108 - -
Csa05g02564 564 ProSitePatterns Carboxylesterases type-B serine active site. 357 372 IPR019826 -
Csa05g02564 564 SUPERFAMILY alpha/beta-Hydrolases 266 524 IPR029058 -
Csa05g02564 564 Gene3D alpha/beta hydrolase 258 513 IPR029058 -
Csa05g02564 564 MobiDBLite consensus disorder prediction 156 174 - -
Csa05g02564 564 MobiDBLite consensus disorder prediction 153 179 - -
Csa05g02564 564 PANTHER ARYLACETAMIDE DEACETYLASE 194 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02045 Csa-Chr3:16585024 Csa05g02564 Csa-Chr5:27018138 3.77E-174 dispersed
Csa05g02564 Csa-Chr5:27018138 Csa06g01593 Csa-Chr6:13637941 2.81E-177 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02564 K15889 - csv:101206426 1087.02