Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02594 ATGAGGACAAAAAGAATGCCTACCATTAACCTTGATCAAATTCCAAGTTTTGAAGAACATGTTAATGGCTTTGATCAACATGATGTGTTGGTTGAGGAGATTGAAGGCCTAATTAGAGTTTACGGAAATGGGTATGTGGAAAGACCCCAGATAGTTCCTTGTGTCTCTAATGCATTGCCGCCGGAGCTCGGTGTTACTTCTTGGGATGTAGTTGTGGATAAACTGAACAACATTTGGGCTCGTTTCTATATTCCGACACAGTGCCAGGAGAAGCTGCCTTTGATTGTTTACTTCCATGGAGGTGGGTTTTGTGTTGGTTCGGCCGCTTGGAGTTGCTATCATGAGTTCCTGGCCAAGCTCTCTGCAAAAGCCAACTGTATAATTATGTCTGTGAATTATCGTTTGGCTCCAGAAAACCCTCTTCCTGCTCCTTATGAAGATGGATTAAAGACCCTTCAATGGTTGAAACAAGTTGCTTTTGTAGGGGGCAAGCAGAATTGGTGGTCAAGATACTGCGACTTTACCAAAATCTACCTTAGTGGTGATAGTGCCGGTGGCAACATAGCCTTCAATGTAGCTGCCAGACTTGGTGGCAAGACGACTGCTTCTGGAGCTGTGATTTTGAAACCGTTAGTTATTAAAGGTAGCATTTTGATACAACCATTTTTCGGTGGAGAGTCGAGGACCAAGTCAGAGAAGTTTCTTGTCCAACCTCCTCGTTCCCCACTGACGTTGGGGGTTTCCGATACGTACTGGCGGCTGGCATTGCCTTCCGGGACAAACCGTGACCACCCATGGTGCAATCCTTCTACAAAAGGATTGTTTACGGTGGAGGATTTGAGGGTTTTGCCTAGTTTGATATGCATATCAGAAATGGACATATTGAAAGATAGGAACTTGGAGTTTTGCTCTGCTTTACATAGAGCGGGTAAGCTGATCAATTATGTGGTTTACGAAGGAGTTGGCCATGCGTTTCAGGTTCTGAACAAGTCACAACTCTCACAAACTCGGACCCTTGAAATGATTGATCATATCAAGGCTTTCTTGTGTGTATAG 1056 44.32 MRTKRMPTINLDQIPSFEEHVNGFDQHDVLVEEIEGLIRVYGNGYVERPQIVPCVSNALPPELGVTSWDVVVDKLNNIWARFYIPTQCQEKLPLIVYFHGGGFCVGSAAWSCYHEFLAKLSAKANCIIMSVNYRLAPENPLPAPYEDGLKTLQWLKQVAFVGGKQNWWSRYCDFTKIYLSGDSAGGNIAFNVAARLGGKTTASGAVILKPLVIKGSILIQPFFGGESRTKSEKFLVQPPRSPLTLGVSDTYWRLALPSGTNRDHPWCNPSTKGLFTVEDLRVLPSLICISEMDILKDRNLEFCSALHRAGKLINYVVYEGVGHAFQVLNKSQLSQTRTLEMIDHIKAFLCV* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27196520 27197575 + CsaV3_5G034130.1 Csa05g02594 530981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02594 351 Pfam alpha/beta hydrolase fold 95 326 IPR013094 GO:0016787
Csa05g02594 351 PANTHER CARBOXYLESTERASE 6-RELATED 20 349 - -
Csa05g02594 351 Gene3D alpha/beta hydrolase 49 350 IPR029058 -
Csa05g02594 351 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 177 189 IPR033140 -
Csa05g02594 351 PANTHER ARYLACETAMIDE DEACETYLASE 20 349 - -
Csa05g02594 351 SUPERFAMILY alpha/beta-Hydrolases 29 349 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00878 Csa-Chr4:6302730 Csa05g02594 Csa-Chr5:27196520 4.49E-07 dispersed
Csa05g02594 Csa-Chr5:27196520 Csa06g02196 Csa-Chr6:19821216 1.94E-59 dispersed
Csa05g02594 Csa-Chr5:27196520 Csa02g01990 Csa-Chr2:18532526 2.50E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02594 - - csv:101213887 727.243