Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02705 ATGGGTGTTCCTGCAACTGCAACTGCAGCTTTGGGGGATGATTTTCTCAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATTCTTGGCTCCTTTGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACTAATTCAATTCGTAAAGCTCACGAAAACATTGATAAGACTTTGAAGTCTGCGGAGGTTATTTTAACACAATTTGATCTCTCTCGTCAGGCAGAAACAAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCGATTGGTCAATTAAGAAACATTATCAAATTTTTTAGCAGCCATAAAGGTTTTAAGAGTAGCGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAAGCAATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGATTCTCCTGGTCATGATTCAGGTGGAAAGAATCATCATTCTGCTCATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCACTCTCATACCACCACGAGTTCTACCACTGCTGCATGATTTATCACAGCAAATGGTTCAAGCTGGTCATCAACAACAAATTTTAAAAGTTTATAGGGACACCCGTTCAGTTGTCCTGGAAGAAAGCCTACGGAAATTAGGAGTTGAAAAACTTAGCAAAGAGGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGTGACCAAATATTTGAAGGCTTTGAGTCACTTAGAGATCAATCATTTGCAGAGGTTACAAGTAGTAGTGTTTCTGTGCTATTCAGTTTTGGGGAGGCGATTGCAAATAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTCTGGACATGTATGAAATTATGCGAGAGCTTCACTCTGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAGTGAGATCAAGGAATCTGCATCGAGTCTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTGGTGATTTTGAGGTAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATCAATTACGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGATAGTGGTCAAACGAATTCAGAATTGGCCAGTGTCACAATGCAAATAATGCAGGCTCTTCAGTCTAATTTGGATGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACTTATTCCTCATGAACAACATACACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTGGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATCCTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGCGTACCAGGTATAGATGGAGGAAATAGTAGCGGTGTTTCTAAGGCACTTATTAAAGACAGGTTCAAGACTTTCAATATGCAATTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCTGATACTGAGTTGCGGGAGTCTCTAAGACTTTCGGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTGAAACGTTTTGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTACGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTGGGAGAATTTTTTGAAGGGAAGAATGTGAATGAACCTAAACGGTAA 1956 41.77 MGVPATATAALGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILTQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSDSPGHDSGGKNHHSAHHDNSLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKVYRDTRSVVLEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIANSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACSEIKESASSLTKRLAQTAKDTFGDFEVAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELASVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNVNEPKR* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27858578 27865729 + CsaV3_5G035240.1 Csa05g02705 531092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02705 651 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa05g02705 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 40 647 - -
Csa05g02705 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 40 647 IPR004140 GO:0000145|GO:0006887
Csa05g02705 651 Coils Coil 134 154 - -
Csa05g02705 651 Gene3D Exocyst complex component Exo70 80 651 - -
Csa05g02705 651 SUPERFAMILY Cullin repeat-like 82 642 IPR016159 -
Csa05g02705 651 MobiDBLite consensus disorder prediction 172 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02774 Csa-Chr3:26573177 Csa05g02705 Csa-Chr5:27858578 1.51E-125 dispersed
Csa04g00918 Csa-Chr4:6741979 Csa05g02705 Csa-Chr5:27858578 6.19E-94 dispersed
Csa05g01620 Csa-Chr5:19199254 Csa05g02705 Csa-Chr5:27858578 2.54E-105 dispersed
Csa05g02705 Csa-Chr5:27858578 Csa06g02721 Csa-Chr6:23807554 0 dispersed
Csa06g02722 Csa-Chr6:23824017 Csa05g02705 Csa-Chr5:27858578 2.25E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02705 K07195 - csv:101206262 1247.65