Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02710 ATGAGATTACTAAAAGAAAGCATTGGCAGTTCATTCCCTCCAAATTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGATTTGTGGCCAAGATGACTGAAGACGAAGCGAAGAAAGTTTCAGAAATGGAAGGGGTGATATCAGTTTTCCCAAATGGGAAAAAGCAACTGCACACAACAAGATCTTGGAACTTCATGGGCTTCTCGGAACAAGTGAAGAGAGTTCCGATGGTGGAAAGTGACATCATTGTTGGGGTATTCGACACCGGAATTTGGCCGGAATCTCCTAGTTTTGACGACACAGGATACGGTCCACCACCGGCTAAGTGGAAGGGCAGCTGTGAAGTCTCTGCCAATTTCTCTTGCAACAAGTAA 375 44.53 MRLLKESIGSSFPPNSLLHSYKRSFNGFVAKMTEDEAKKVSEMEGVISVFPNGKKQLHTTRSWNFMGFSEQVKRVPMVESDIIVGVFDTGIWPESPSFDDTGYGPPPAKWKGSCEVSANFSCNK* 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27886212 27886799 - CsaV3_5G035290.1 Csa05g02710 531097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02710 124 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 58 IPR037045 -
Csa05g02710 124 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 124 IPR045051 -
Csa05g02710 124 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 4 124 - -
Csa05g02710 124 Pfam Peptidase inhibitor I9 11 58 IPR010259 -
Csa05g02710 124 Gene3D Peptidase S8/S53 domain 59 124 IPR036852 GO:0004252|GO:0006508
Csa05g02710 124 SUPERFAMILY Subtilisin-like 21 100 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02710 Csa-Chr5:27886212 Csa05g00114 Csa-Chr5:577314 7.03E-71 dispersed
Csa05g02710 Csa-Chr5:27886212 Csa05g02711 Csa-Chr5:27889742 2.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02710 - - csv:116404044 258.455