Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02711 ATGGTTCTTGAGAAAAATTTACTGGTTCCTGTTCACTACGCCATTCTACCAGATCTCTCTTCCTCTCTATACTACGGCATTTCAATGACATATATTGTGTACATGGGAAGTCATTCAAAAGGGAAAGTTTCAACTTCATCTCACCATATAAGATTACTAAAAGAAACCATCGGCAGTTCTTTTCCTCCACATTCCTTACTCCATAGCTTCAAAAGAAGCTTCAATGGATTTGTGGCCAAGCTGACTGAAGCAGAAGTAAAGAAAGTATCAGAAATGGAAGGGGTGATATCAGTTTTCCCAAATGGGAAAAAGCAACTGCACACAACAAGATCTTGGGACTTCATGGGCTTCTCGGAACAGGTGAAGAGAGTTCCGGCGGTGGAAAGCAATGTGATTGTCGGAGTTTTGGACAGCGGAATTTGGCCGGAGTCTCCTAGTTTTGACCACGCAGGATACGGTTCGCCGCCGGCCAAGTGGAAGGGCAGCTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGATCGTATCGTAGTAATGGTGAGTATCCAGAAGGCGACATCAAAGGTCCAAGAGATTCAGATGGCCACGGTACCCATACAGCATCGATAGTGGCGGGAGGGTTGGTTCGGCGAGCGAGCATGTTGGGACTCGGCCTCGGCACAGCAAGAGGCGGAGTCCCATCAGCACGCATTGCTGCATACAAAGTATGCTGGTCCGACGGCTGCTCCGATGCCGACATCCTTGCTGCATTTGATGATGCCATCGCTGACGGTGTCGACATCATCTCTGGCTCTCTTGGAGGATCAGGAGCTAGAGATTACTTTAATGACTCCATAGCCATCGGATCTTTCCATGCAATGAAGAAGGGAATCTTGACGTCATTGGCTGTTGGAAATAACGGCCCAGATTTCACAACCATTGTGAACTTCTCGCCGTGGTCGTTGTCGGTGGCGGCTAGCACCACTGATCGGAAATTCGAAACTAAAGTTGAGCTCGGAGATGGAAGAGAATTCAGCGGAGTCAGCGTCAATACATTTGATATTAAGGGAAAACAAATTCCATTGGTTTACGCCGGAGACATTCCGAAAGCTCCCTTCGACAGTTCTGTATCCAGGTTGTGTTTTGAGAACACGGTAGATTTGAAGTTGGTAAAAGGTAAAATTGTAGTATGCGATTCATTAACTGTTCCAGGAGGAGTTGTGGCGGTAAAAGGTGCAGTGGGTATTATAATGCAAGATGATTCTTCTCATGATGATACCAACTCCTTTCCAATTCCTGCTTCTCATCTTGGCCCCAAAGCTGGTGCCCTCGTTCTCTCTTATATCAACTCAACCAATAGCATTCCAACAGCAACAATAAAGAAGAGCACAGAAAGAAAACGTAAAAGAGCTCCGTCTGTTGCATCCTTTTCTTCAAGAGGTCCAAACCCAATCACTCCCAACATTCTCAAGCCAGATTTGAGTGGCCCAGGAGTTGAAATTCTTGCAGCATGGTCTCCAGTTTCTCCACCCTCAGGAGCCGAAGAGGATAACAAAAGAGTTCTTTACAATATCATCTCAGGAACTTCAATGGCTTGTCCACATGTCACTGCTGCTGCTGCTTACGTTAAATCATTTCATCCTACTTGGTCTCCTTCTGCCCTTAAATCCGCCCTCATCACTACTGCATTTCCAATGAGCCCTAAACATAATCCAGACAAAGAGTTTGGATATGGCGCTGGTCACATAAATCCACTAGGCGCCGTGCATCCTGGATTAATCTACGATGCTTCTGAAATCGACTATGTACAATTTTTGTGCGGTCAAGGTTATACCACCGAGTTGCTCCAACTAGTCTCGGAAGACAACAATACTTGTTCTTCGAACAATTCCGATACAGTGTTCGACCTAAACTATCCTTCATTCGCTCTCTCCACGAATATCTCAAAACCGATCAACCAAGTTTATAAAAGAACTGTCACCAATGTTGGATCAAAATACGCAACATATAAAGCTACTGTAATTAATCCATGGAAGAACCTTGAGATCAAAGTAAACCCTTCTGTTCTTTCATTCAAGAACTTGGGAGAGAAGCAAAGTTTTGAGGTTACAATCAGAGGGAAAATTAGGAAAGATATTGAATCAGCTTCTTTGGTTTGGGATGACGGAAAACACAAAGTGAGGAGTCCTATAACAGTGTTTATTGCTAATATTATTCACTCTTCATAA 2223 44.4 MVLEKNLLVPVHYAILPDLSSSLYYGISMTYIVYMGSHSKGKVSTSSHHIRLLKETIGSSFPPHSLLHSFKRSFNGFVAKLTEAEVKKVSEMEGVISVFPNGKKQLHTTRSWDFMGFSEQVKRVPAVESNVIVGVLDSGIWPESPSFDHAGYGSPPAKWKGSCEVSANFSCNNKIIGARSYRSNGEYPEGDIKGPRDSDGHGTHTASIVAGGLVRRASMLGLGLGTARGGVPSARIAAYKVCWSDGCSDADILAAFDDAIADGVDIISGSLGGSGARDYFNDSIAIGSFHAMKKGILTSLAVGNNGPDFTTIVNFSPWSLSVAASTTDRKFETKVELGDGREFSGVSVNTFDIKGKQIPLVYAGDIPKAPFDSSVSRLCFENTVDLKLVKGKIVVCDSLTVPGGVVAVKGAVGIIMQDDSSHDDTNSFPIPASHLGPKAGALVLSYINSTNSIPTATIKKSTERKRKRAPSVASFSSRGPNPITPNILKPDLSGPGVEILAAWSPVSPPSGAEEDNKRVLYNIISGTSMACPHVTAAAAYVKSFHPTWSPSALKSALITTAFPMSPKHNPDKEFGYGAGHINPLGAVHPGLIYDASEIDYVQFLCGQGYTTELLQLVSEDNNTCSSNNSDTVFDLNYPSFALSTNISKPINQVYKRTVTNVGSKYATYKATVINPWKNLEIKVNPSVLSFKNLGEKQSFEVTIRGKIRKDIESASLVWDDGKHKVRSPITVFIANIIHSS* 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27889742 27895518 - CsaV3_5G035300.1 Csa05g02711 531098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02711 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 107 IPR037045 -
Csa05g02711 740 Pfam Subtilase family 129 577 IPR000209 GO:0006508|GO:0008236
Csa05g02711 740 Pfam Fibronectin type-III domain 634 731 IPR041469 -
Csa05g02711 740 MobiDBLite consensus disorder prediction 458 477 - -
Csa05g02711 740 CDD Peptidases_S8_3 104 561 IPR034197 -
Csa05g02711 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Csa05g02711 740 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Csa05g02711 740 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Csa05g02711 740 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Csa05g02711 740 PANTHER PUTATIVE-RELATED 19 732 - -
Csa05g02711 740 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Csa05g02711 740 Gene3D - 604 733 - -
Csa05g02711 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 732 IPR045051 -
Csa05g02711 740 Gene3D Peptidase S8/S53 domain 130 600 IPR036852 GO:0004252|GO:0006508
Csa05g02711 740 Gene3D - 328 465 - -
Csa05g02711 740 CDD PA_subtilisin_like 335 458 - -
Csa05g02711 740 ProSiteProfiles Serine proteases, subtilase domain profile. 111 587 - -
Csa05g02711 740 SUPERFAMILY Subtilisin-like 106 591 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00114 Csa-Chr5:577314 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g00752 Csa-Chr5:5190764 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g00753 Csa-Chr5:5202603 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g00754 Csa-Chr5:5213871 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g01055 Csa-Chr5:10517396 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g01060 Csa-Chr5:10608689 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g02709 Csa-Chr5:27883660 Csa05g02711 Csa-Chr5:27889742 0 proximal
Csa05g02710 Csa-Chr5:27886212 Csa05g02711 Csa-Chr5:27889742 2.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02711 - - csv:101203698 1403.27