Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02711 | ATGGTTCTTGAGAAAAATTTACTGGTTCCTGTTCACTACGCCATTCTACCAGATCTCTCTTCCTCTCTATACTACGGCATTTCAATGACATATATTGTGTACATGGGAAGTCATTCAAAAGGGAAAGTTTCAACTTCATCTCACCATATAAGATTACTAAAAGAAACCATCGGCAGTTCTTTTCCTCCACATTCCTTACTCCATAGCTTCAAAAGAAGCTTCAATGGATTTGTGGCCAAGCTGACTGAAGCAGAAGTAAAGAAAGTATCAGAAATGGAAGGGGTGATATCAGTTTTCCCAAATGGGAAAAAGCAACTGCACACAACAAGATCTTGGGACTTCATGGGCTTCTCGGAACAGGTGAAGAGAGTTCCGGCGGTGGAAAGCAATGTGATTGTCGGAGTTTTGGACAGCGGAATTTGGCCGGAGTCTCCTAGTTTTGACCACGCAGGATACGGTTCGCCGCCGGCCAAGTGGAAGGGCAGCTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGATCGTATCGTAGTAATGGTGAGTATCCAGAAGGCGACATCAAAGGTCCAAGAGATTCAGATGGCCACGGTACCCATACAGCATCGATAGTGGCGGGAGGGTTGGTTCGGCGAGCGAGCATGTTGGGACTCGGCCTCGGCACAGCAAGAGGCGGAGTCCCATCAGCACGCATTGCTGCATACAAAGTATGCTGGTCCGACGGCTGCTCCGATGCCGACATCCTTGCTGCATTTGATGATGCCATCGCTGACGGTGTCGACATCATCTCTGGCTCTCTTGGAGGATCAGGAGCTAGAGATTACTTTAATGACTCCATAGCCATCGGATCTTTCCATGCAATGAAGAAGGGAATCTTGACGTCATTGGCTGTTGGAAATAACGGCCCAGATTTCACAACCATTGTGAACTTCTCGCCGTGGTCGTTGTCGGTGGCGGCTAGCACCACTGATCGGAAATTCGAAACTAAAGTTGAGCTCGGAGATGGAAGAGAATTCAGCGGAGTCAGCGTCAATACATTTGATATTAAGGGAAAACAAATTCCATTGGTTTACGCCGGAGACATTCCGAAAGCTCCCTTCGACAGTTCTGTATCCAGGTTGTGTTTTGAGAACACGGTAGATTTGAAGTTGGTAAAAGGTAAAATTGTAGTATGCGATTCATTAACTGTTCCAGGAGGAGTTGTGGCGGTAAAAGGTGCAGTGGGTATTATAATGCAAGATGATTCTTCTCATGATGATACCAACTCCTTTCCAATTCCTGCTTCTCATCTTGGCCCCAAAGCTGGTGCCCTCGTTCTCTCTTATATCAACTCAACCAATAGCATTCCAACAGCAACAATAAAGAAGAGCACAGAAAGAAAACGTAAAAGAGCTCCGTCTGTTGCATCCTTTTCTTCAAGAGGTCCAAACCCAATCACTCCCAACATTCTCAAGCCAGATTTGAGTGGCCCAGGAGTTGAAATTCTTGCAGCATGGTCTCCAGTTTCTCCACCCTCAGGAGCCGAAGAGGATAACAAAAGAGTTCTTTACAATATCATCTCAGGAACTTCAATGGCTTGTCCACATGTCACTGCTGCTGCTGCTTACGTTAAATCATTTCATCCTACTTGGTCTCCTTCTGCCCTTAAATCCGCCCTCATCACTACTGCATTTCCAATGAGCCCTAAACATAATCCAGACAAAGAGTTTGGATATGGCGCTGGTCACATAAATCCACTAGGCGCCGTGCATCCTGGATTAATCTACGATGCTTCTGAAATCGACTATGTACAATTTTTGTGCGGTCAAGGTTATACCACCGAGTTGCTCCAACTAGTCTCGGAAGACAACAATACTTGTTCTTCGAACAATTCCGATACAGTGTTCGACCTAAACTATCCTTCATTCGCTCTCTCCACGAATATCTCAAAACCGATCAACCAAGTTTATAAAAGAACTGTCACCAATGTTGGATCAAAATACGCAACATATAAAGCTACTGTAATTAATCCATGGAAGAACCTTGAGATCAAAGTAAACCCTTCTGTTCTTTCATTCAAGAACTTGGGAGAGAAGCAAAGTTTTGAGGTTACAATCAGAGGGAAAATTAGGAAAGATATTGAATCAGCTTCTTTGGTTTGGGATGACGGAAAACACAAAGTGAGGAGTCCTATAACAGTGTTTATTGCTAATATTATTCACTCTTCATAA | 2223 | 44.4 | MVLEKNLLVPVHYAILPDLSSSLYYGISMTYIVYMGSHSKGKVSTSSHHIRLLKETIGSSFPPHSLLHSFKRSFNGFVAKLTEAEVKKVSEMEGVISVFPNGKKQLHTTRSWDFMGFSEQVKRVPAVESNVIVGVLDSGIWPESPSFDHAGYGSPPAKWKGSCEVSANFSCNNKIIGARSYRSNGEYPEGDIKGPRDSDGHGTHTASIVAGGLVRRASMLGLGLGTARGGVPSARIAAYKVCWSDGCSDADILAAFDDAIADGVDIISGSLGGSGARDYFNDSIAIGSFHAMKKGILTSLAVGNNGPDFTTIVNFSPWSLSVAASTTDRKFETKVELGDGREFSGVSVNTFDIKGKQIPLVYAGDIPKAPFDSSVSRLCFENTVDLKLVKGKIVVCDSLTVPGGVVAVKGAVGIIMQDDSSHDDTNSFPIPASHLGPKAGALVLSYINSTNSIPTATIKKSTERKRKRAPSVASFSSRGPNPITPNILKPDLSGPGVEILAAWSPVSPPSGAEEDNKRVLYNIISGTSMACPHVTAAAAYVKSFHPTWSPSALKSALITTAFPMSPKHNPDKEFGYGAGHINPLGAVHPGLIYDASEIDYVQFLCGQGYTTELLQLVSEDNNTCSSNNSDTVFDLNYPSFALSTNISKPINQVYKRTVTNVGSKYATYKATVINPWKNLEIKVNPSVLSFKNLGEKQSFEVTIRGKIRKDIESASLVWDDGKHKVRSPITVFIANIIHSS* | 741 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 27889742 | 27895518 | - | CsaV3_5G035300.1 | Csa05g02711 | 531098 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02711 | 740 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 26 | 107 | IPR037045 | - | |
Csa05g02711 | 740 | Pfam | Subtilase family | 129 | 577 | IPR000209 | GO:0006508|GO:0008236 | |
Csa05g02711 | 740 | Pfam | Fibronectin type-III domain | 634 | 731 | IPR041469 | - | |
Csa05g02711 | 740 | MobiDBLite | consensus disorder prediction | 458 | 477 | - | - | |
Csa05g02711 | 740 | CDD | Peptidases_S8_3 | 104 | 561 | IPR034197 | - | |
Csa05g02711 | 740 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 526 | 536 | IPR023828 | - | |
Csa05g02711 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 128 | 147 | IPR015500 | - | |
Csa05g02711 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 525 | 541 | IPR015500 | - | |
Csa05g02711 | 740 | PRINTS | Subtilisin serine protease family (S8) signature | 197 | 210 | IPR015500 | - | |
Csa05g02711 | 740 | PANTHER | PUTATIVE-RELATED | 19 | 732 | - | - | |
Csa05g02711 | 740 | Pfam | Peptidase inhibitor I9 | 30 | 106 | IPR010259 | - | |
Csa05g02711 | 740 | Gene3D | - | 604 | 733 | - | - | |
Csa05g02711 | 740 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 19 | 732 | IPR045051 | - | |
Csa05g02711 | 740 | Gene3D | Peptidase S8/S53 domain | 130 | 600 | IPR036852 | GO:0004252|GO:0006508 | |
Csa05g02711 | 740 | Gene3D | - | 328 | 465 | - | - | |
Csa05g02711 | 740 | CDD | PA_subtilisin_like | 335 | 458 | - | - | |
Csa05g02711 | 740 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 111 | 587 | - | - | |
Csa05g02711 | 740 | SUPERFAMILY | Subtilisin-like | 106 | 591 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g00114 | Csa-Chr5:577314 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g00752 | Csa-Chr5:5190764 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g00753 | Csa-Chr5:5202603 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g00754 | Csa-Chr5:5213871 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g01055 | Csa-Chr5:10517396 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g01060 | Csa-Chr5:10608689 | Csa05g02711 | Csa-Chr5:27889742 | 0 | dispersed | |
Csa05g02709 | Csa-Chr5:27883660 | Csa05g02711 | Csa-Chr5:27889742 | 0 | proximal | |
Csa05g02710 | Csa-Chr5:27886212 | Csa05g02711 | Csa-Chr5:27889742 | 2.20E-73 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02711 | - | - | csv:101203698 | 1403.27 |