Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02756 ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAGGGCAACGCTTCTAATGGTGGCAATGTTCAGAGATCCAAGAGCTTTGCCTTTCGAGCTCCTCAGGAGAATTTTACAATCCAGGATTTTGAATTGGGAAAAATTTATGGGGTTGGTTCATATTCCAAGGTCGTGAGGGCGAAGAAGAAGGACACAGGAATTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAATTGGACCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATACTTTCTCTTTGTACATGGCATTGGAGTCTTGTGAAGGTGGAGAACTTTTTGATCAGATAACTAGGAAAGGTTGTCTGTCGGAAGATGAAGCTCGGTTTTATACTGCAGAGGTGGTGGATGCCCTTGAATACATACACAGCATGGGATTGATACACCGCGATATCAAGCCTGAAAACTTGCTACTTACTACTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTGGATAGTCGAATTACGGTTCTCCCAAATGCTGCATCAGATGATAAAGCTTGTACATTTGTGGGAACGGCTGCATATGTTCCTCCAGAGGTCCTTAATTCCTCCCCAGCAACTTTCGGAAATGACCTTTGGGCACTCGGGTGTACCTTGTATCAGATGCTTTCTGGTACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTTCAGAAAATCGTAGCACGAGATATAAAATTCCCCAGCTATTTTTCCGAGCAAGCAAGGGACCTCATCGATCACCTATTGGATTTAGATCCCAGCAAGAGACCAGGTGCCGGAGCTGAGGGTTATGTTTCTCTCAAGAGTCATCCCTTCTTTGAGGGGGTTGATTGGAGCAAAATAAGATCACAAACTCCTCCCAGGCTTGCTTTAGAACCAGGGAGTCATTCAAATGAGAACGACGATAGCTCCGAGTCTTCTTGGAATCCTTCACATATTGGAGACGGCACATCGAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCAGAAGGATCACATCATATTACTCGACTTGCATCGATCGACTCCTTTGATTCAAAATGGCAACAATTCCTCGAACCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAACTTCAGAAAATAACAAGCAAAAAGGTTCAACTCATCCTTACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAATATTATCTGGTCTGACAATCCTGTTGACCTCAGCGTTCAAGTGACCAGTCCTTCACATTTCAAGATTTGCACACCAAAGAAGATTGCCTCGTTTGAGGACGCGAAACAGCGAGCGTGGCAGTGGAAGAAGGCGATCGAGGTGCTTCAAAACCGATGA 1470 42.59 MLAMEKDFDAKLMIQGNASNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGCLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTTDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPSKRPGAGAEGYVSLKSHPFFEGVDWSKIRSQTPPRLALEPGSHSNENDDSSESSWNPSHIGDGTSRQNDGNAGSASTSEGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKITSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPVDLSVQVTSPSHFKICTPKKIASFEDAKQRAWQWKKAIEVLQNR* 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28282064 28287881 - CsaV3_5G035750.1 Csa05g02756 531143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02756 489 MobiDBLite consensus disorder prediction 324 373 - -
Csa05g02756 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Csa05g02756 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Csa05g02756 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 485 - -
Csa05g02756 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 485 - -
Csa05g02756 489 SUPERFAMILY Protein kinase-like (PK-like) 41 372 IPR011009 -
Csa05g02756 489 MobiDBLite consensus disorder prediction 334 373 - -
Csa05g02756 489 SUPERFAMILY PH domain-like 305 488 - -
Csa05g02756 489 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g02756 489 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
Csa05g02756 489 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g02756 489 Gene3D - 356 489 IPR011993 -
Csa05g02756 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa05g02756 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Csa05g02756 489 Coils Coil 469 489 - -
Csa05g02756 489 Pfam PH domain 386 488 IPR033931 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02756 Csa-Chr5:28282064 Csa01g00192 Csa-Chr1:1256453 1.00E-63 dispersed
Csa05g02756 Csa-Chr5:28282064 Csa07g00227 Csa-Chr7:1788691 3.95E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78287 PF00069 Pkinase 4.70E-66 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02756 K06276 - csv:101212874 969.148