Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02774 ATGCTGATTTTATTCCTATCCATAAGTAGTGGCGTTGGTAGAACGTTAACGGTGATTGACAATTTGGGTCAAATCGGAATGTCTTTGGGATACCCAAAAAAAAGCATTAGCACATTCATAACATTAGTCAGTATTTGGAATTACCTCGGTCGAGTTGTCTCTGGTTTCGTCTCTGAAATCGTTTTCATTAAATACAAATTCCCTCGTCCTTTAATACTTTCTCTGATCCTTCTTTTATCCTGTTTTGGCTACTTGATGATGGCATTTGATGTCCTATATGGAGTATCTGTTGCTTCCATCGTAATCGGATTCTGTTTAGGAGCACAATGCCCAGTAATTTTCGTCATAATTTCAGAGATTTTTGGGTGGAAATATTACTCAACGCTTTACAATTTCGGGACAGTTGCGATGCCAATTGGACTTTATATTCTGAATATGAAAGTGGTTGGGAAGTTGTACGATAGAGAAGCAGAGAAACAGCTCAAAGCAAAAGGGATTATACGAAAAGCAGGGGAAGAACTAAATGATGAGAACGAAGTTTCTACAAGAGTGATATTTACAAGAAGTTCAGAAATGAAGCTGAAACAGAAGTCGTTAGAAATGGGGCTGTGGAAGCTGCCGGAGCACCGGAGGAAACGAGAAAATGATGGAAATGTGAAAAAAGATGGAAGAAATTAA 678 38.35 MLILFLSISSGVGRTLTVIDNLGQIGMSLGYPKKSISTFITLVSIWNYLGRVVSGFVSEIVFIKYKFPRPLILSLILLLSCFGYLMMAFDVLYGVSVASIVIGFCLGAQCPVIFVIISEIFGWKYYSTLYNFGTVAMPIGLYILNMKVVGKLYDREAEKQLKAKGIIRKAGEELNDENEVSTRVIFTRSSEMKLKQKSLEMGLWKLPEHRRKRENDGNVKKDGRN* 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28442948 28443711 - CsaV3_5G035930.1 Csa05g02774 531161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02774 225 Gene3D MFS general substrate transporter like domains 1 153 IPR036259 -
Csa05g02774 225 SUPERFAMILY MFS general substrate transporter 4 154 IPR036259 -
Csa05g02774 225 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 175 - -
Csa05g02774 225 MobiDBLite consensus disorder prediction 206 225 - -
Csa05g02774 225 PANTHER MFS TRANSPORTER 1 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02774 Csa-Chr5:28442948 Csa05g02776 Csa-Chr5:28446206 5.87E-88 dispersed
Csa05g02773 Csa-Chr5:28438039 Csa05g02774 Csa-Chr5:28442948 2.53E-75 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02774 - - csv:101205265 269.626