Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g02775 | ATGGTGGTTAGCGAAGAAATTACATTGAGATGCTTCGACATAAAAGGCATAGTCCTCCACATCATAACTGGACGATGGTTCATGGTTTTTGCTTCACTCCTAATCATGGCAATGTCTGAATCAATGTACATGTTCGGTTTGTATTCGAGCTACATTAAATCGATTTTGGGTTACGACCAAACGACATTGACTTTGTTGAGTTTTATTAAGGATTTGGGTGCAAACGTCGGCGTTTTATCTGGTCTCATTAACGAGGTTAAAACCCAATTAGGTATTTTAAAGGGATACGTCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCATGCATTTTACGGCGGCGACACCAAATCCTTAATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAGTTCGTATCATGAAAGTCATCAGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGTACAAACGCAAAACAGAGTTCACTCAAAACCAATATGGTGGCAGCGCTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTCCCCATCGTCATTATCGAAGAATACAATCTCTGGAAACTTAA | 639 | 42.88 | MVVSEEITLRCFDIKGIVLHIITGRWFMVFASLLIMAMSESMYMFGLYSSYIKSILGYDQTTLTLLSFIKDLGANVGVLSGLINEVKTQLGILKGYVGLSGAIITQLFHAFYGGDTKSLILLIGWLPAAISFAFLRTVRIMKVIRQPNELKVFYNFLYISLVLAGFLMLMIIVQTQNRVHSKPIWWQRCRHRRPSPPPTPHRHYRRIQSLET* | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 28443878 | 28444779 | - | CsaV3_5G035940.1 | Csa05g02775 | 531162 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g02775 | 212 | MobiDBLite | consensus disorder prediction | 191 | 212 | - | - | |
Csa05g02775 | 212 | PANTHER | MFS TRANSPORTER | 90 | 178 | - | - | |
Csa05g02775 | 212 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 11 | 87 | - | - | |
Csa05g02775 | 212 | Pfam | Nodulin-like | 25 | 86 | IPR010658 | - | |
Csa05g02775 | 212 | Pfam | Nodulin-like | 90 | 181 | IPR010658 | - | |
Csa05g02775 | 212 | PANTHER | MFS TRANSPORTER | 11 | 87 | - | - | |
Csa05g02775 | 212 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 90 | 178 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g02775 | Csa-Chr5:28443878 | Csa05g02777 | Csa-Chr5:28449849 | 7.33E-35 | dispersed | |
Csa05g02775 | Csa-Chr5:28443878 | Csa05g02776 | Csa-Chr5:28446206 | 1.64E-33 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g02775 | - | - | csv:101205265 | 165.236 |