Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02775 ATGGTGGTTAGCGAAGAAATTACATTGAGATGCTTCGACATAAAAGGCATAGTCCTCCACATCATAACTGGACGATGGTTCATGGTTTTTGCTTCACTCCTAATCATGGCAATGTCTGAATCAATGTACATGTTCGGTTTGTATTCGAGCTACATTAAATCGATTTTGGGTTACGACCAAACGACATTGACTTTGTTGAGTTTTATTAAGGATTTGGGTGCAAACGTCGGCGTTTTATCTGGTCTCATTAACGAGGTTAAAACCCAATTAGGTATTTTAAAGGGATACGTCGGGCTAAGCGGCGCCATAATCACACAGCTCTTCCATGCATTTTACGGCGGCGACACCAAATCCTTAATTCTCCTCATCGGATGGCTTCCGGCTGCAATTTCCTTCGCATTCTTACGAACAGTTCGTATCATGAAAGTCATCAGACAGCCAAATGAGCTCAAAGTTTTCTACAATTTCCTCTACATTTCTCTTGTTCTCGCCGGATTCCTCATGCTAATGATCATTGTACAAACGCAAAACAGAGTTCACTCAAAACCAATATGGTGGCAGCGCTGCCGCCATCGTCGTCCTTCTCCTCCTCCCACTCCCCATCGTCATTATCGAAGAATACAATCTCTGGAAACTTAA 639 42.88 MVVSEEITLRCFDIKGIVLHIITGRWFMVFASLLIMAMSESMYMFGLYSSYIKSILGYDQTTLTLLSFIKDLGANVGVLSGLINEVKTQLGILKGYVGLSGAIITQLFHAFYGGDTKSLILLIGWLPAAISFAFLRTVRIMKVIRQPNELKVFYNFLYISLVLAGFLMLMIIVQTQNRVHSKPIWWQRCRHRRPSPPPTPHRHYRRIQSLET* 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28443878 28444779 - CsaV3_5G035940.1 Csa05g02775 531162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02775 212 MobiDBLite consensus disorder prediction 191 212 - -
Csa05g02775 212 PANTHER MFS TRANSPORTER 90 178 - -
Csa05g02775 212 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 87 - -
Csa05g02775 212 Pfam Nodulin-like 25 86 IPR010658 -
Csa05g02775 212 Pfam Nodulin-like 90 181 IPR010658 -
Csa05g02775 212 PANTHER MFS TRANSPORTER 11 87 - -
Csa05g02775 212 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 90 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02775 Csa-Chr5:28443878 Csa05g02777 Csa-Chr5:28449849 7.33E-35 dispersed
Csa05g02775 Csa-Chr5:28443878 Csa05g02776 Csa-Chr5:28446206 1.64E-33 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02775 - - csv:101205265 165.236