Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02778 ATGTTGGCCAGTGGAAGAATCGTGGGATGCTTCGACATGGGGAGCATTGTCGTCCACATCATCACCGGACGATGGTTCATATTGTTCGCTTCACTCTTAATCATGGCGGTGTCAGGAGCAACATACATGTTTAGCCTGTATTCAAACGACCTAAAATCGATTTTAGGTTACGACCAAACAACGTTAAATTTGTTGAGTTTTTCTAAGGATTTGGGTGCAAACGTTGGTATTTTGTCTGGACTTGTGAACCAGGTTACACCGCCGTGGGTGGTTTTGTCCATTGGCGCCATTATGAATTTCTTTGGTTACTTTATGATTTGGCTCGCCATTACTAATCGAATCTCCACTCCCAAAGTTTGGCAAATGTGTCTTTATATTTGTATTGGAGCCAATTCTCAATCCTTTTCTAATACAGGTTCGATAGTTACTTGTGTCAAGAATTTTCCTCAAAGTCGTGGCGCCGTTCTTGGTATCCTAAAGGGATACGTCGGGCTGAGCGGCGCTATAATCACACAACTCTTCCACGCATTTTATGGCGCCGACGAGAAATCCTTAATTCTCTTCATCGCATGGCTCCCGACGGCAATTTCCTGTGCATCTTTACCCATAATTCGTATCATGAAATTCATCCGACAACCAAACGAGCTCAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGCTCTCGCCGGGTTCCTAATGTTAGTGATCATTGTAGAGAGCAAAACAAAGTTCACTCAAAACCAATACGGTGGCATCGTCGCGGTCGTTCTCCTCCTCCCACTCGTCATCGTTGTCATGGAAGAATACAATCTCTGGAAACTCAAAACCACTCTCATTAAATCCTCAAACCCCTCTGTTCAAATCGTTACAGAGCAACTCCCAAAAACAGAGCATCCAAAACAAGAACAAAAAGAACCATCTTGTTGGAGAACAATATTCAGCCCACCAGAACGCGGCGAGGATTTCACAATTCTCCAAGGTCTCTTCAGCGTCGACATGCTGATTCTATTAACGTCTGTAGCTTGCGGCTTGGGAGGAACGTTAACGGCAATAGATAATTTGGGGCAAATCGGAATGTCGTTGGGATACCCAAAAAAAAGCATTAGCATATTTGTAACATTAGTCAGCATTTGGAGTTACCTCGGCCGAGTTGGCTGTGGTTTCATCTCTGAAATCGTTTTGATAAAATACAAATTCCCTCGTACTTTAATATTATCACTGATCCTTCTGTTGTCCTGTGTCGGCCACTTGATGATCGCATTTGACGTCCCAAATGGGCTATACGTTGCTTCCATCGTAATCGGATTCTGCTTCGGAGCACAATGGCCATTGGTTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACGCCACACTACACGTTTTTGGGGCAGTGGCGAGCCCAGTTGGGCTTTATGTTCTGAATGTGAAAGTGGCAGGGAACTTCTACGACAGAGAAGCAAGGAAGCAGCTCAACACGAAAGGGATTTTACGAAAAGCAGGGAAAGAACTAAATTGCTATGGAGGGGAATGTTTTAAGCTTTCGTTCACCGTAATCACTGCAGTTACTTTGATGGGTATGTTTATTTCATTGATTTTAGTGATTAGAACAAGAAGTTTCTACAAAAGTGATATTTATAAGAAGTTTAGAGATGAAGCCGAAACAGAGGTGGCCGGAAATGAGGCTGTGGCGACGGCGGGAGCAGTAGAAGAGACAGAGAAAACTATAATCCAAAGAAGAAGTTGA 1755 43.08 MLASGRIVGCFDMGSIVVHIITGRWFILFASLLIMAVSGATYMFSLYSNDLKSILGYDQTTLNLLSFSKDLGANVGILSGLVNQVTPPWVVLSIGAIMNFFGYFMIWLAITNRISTPKVWQMCLYICIGANSQSFSNTGSIVTCVKNFPQSRGAVLGILKGYVGLSGAIITQLFHAFYGADEKSLILFIAWLPTAISCASLPIIRIMKFIRQPNELKVFYNFLYISLALAGFLMLVIIVESKTKFTQNQYGGIVAVVLLLPLVIVVMEEYNLWKLKTTLIKSSNPSVQIVTEQLPKTEHPKQEQKEPSCWRTIFSPPERGEDFTILQGLFSVDMLILLTSVACGLGGTLTAIDNLGQIGMSLGYPKKSISIFVTLVSIWSYLGRVGCGFISEIVLIKYKFPRTLILSLILLLSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLVFAIISELFGLKYYATLHVFGAVASPVGLYVLNVKVAGNFYDREARKQLNTKGILRKAGKELNCYGGECFKLSFTVITAVTLMGMFISLILVIRTRSFYKSDIYKKFRDEAETEVAGNEAVATAGAVEETEKTIIQRRS* 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28453067 28455462 - CsaV3_5G035970.1 Csa05g02778 531165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02778 584 CDD MFS_Mch1p_like 23 530 - -
Csa05g02778 584 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 577 - -
Csa05g02778 584 SUPERFAMILY MFS general substrate transporter 25 542 IPR036259 -
Csa05g02778 584 PANTHER MFS TRANSPORTER 11 577 - -
Csa05g02778 584 Pfam Nodulin-like 24 265 IPR010658 -
Csa05g02778 584 Gene3D MFS general substrate transporter like domains 325 545 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02778 Csa-Chr5:28453067 Csa05g02780 Csa-Chr5:28460136 0 dispersed
Csa05g02777 Csa-Chr5:28449849 Csa05g02778 Csa-Chr5:28453067 0 tandem
Csa05g02778 Csa-Chr5:28453067 Csa05g02779 Csa-Chr5:28456728 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02778 - - csv:101204780 1110.9