Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02779 ATGTTGGCCGGTGAAAGAATCTTGGGATGCTTCGACATAAGGAGCATTGTCGTCCACGTCATCACTAGACGGTGGTTTGTGTTGTTCGCTTCACTCCTAATCATGGGCGTGGCAGGATCAACGTACATATTTAGCTTGTACTCAAACGACATAAAATCAACTTTGGGTTATGACCAAACAACATTGAATTTGTTGAGTTTTTCTAAGGATCTGGGTGCAAACATTGGTGTTTTGTCTGGACTTATCAACGAGGTTACGCCGCCATGGGTGGTTTTGTCCATTGGTGCCTTAATGAATTTCTTTGGTTACTTTATGATTTGGCTTGCCATTACTAATCGAATCTCCACTCCCAAAGTTTGGCAAATGTGTCTTTATATTTGTATTGGAGCCAATTCTCAATCCTTTGCTAATACGGGTTCGATGGTTACTTGTGTCATGAATTTTCCTGAAAGTCGTGGTGTCGTTCTTGGTATTTTAAAGGGATACGCTGGGCTGAGCGGCGCTATAATCACACAACTCTTCCACGCATTCTATGGCGCCGACACCAAATCCTTAGTTCTCTTCATCGGATGGCTCCCGACGGCAGTTTCCTTTGCATCTTTACGGATAATTCGTATCATAAAAGTCATCCGACAACCAAACGAGCTCAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGCTCTCGCCGGGTTCCTAATGTTAATGATCATTGTAGAGAGCAAAACAGAGTTCACTCAAAACCAATACGGTGGCAGCGCCGCCGTCGTCCTCCTCCTTCTTCTCCTCCCACTCCTTATTGTCGTTATGGAAGAATACAAACTCTGGAAACTCAAAACTGCTCTCATCCAATCCCCAAATCCCTCTGTTCAAATCGTTACAGAGCAACTCCCCAAAACAGAGCATCCAAAACAAGAACATAAAGAACCATCTTGTTGGACAACAATTTTCAGCCCACCAAAACGCGGCGAAGATTTCACAATTCTCCAAGGTCTCTTCAGCGTCGACATGCTGATTCTATTCACATCTGCAGCTTGCGGCATGGGAGGAACGTTAACGGCAATCGACAATTTGGGGCAAATCGGAGTGTCTTTGGGATACCCAAAAAGAAGCATTAGCACGTTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTGTGGTTTCTTATCTGAAATCGTGTTGAGAAAATACAAATGCCCTCGTACTTTAATATTATCACTGATCCTTCTGTTGTCCTGTGTCGGCCATTTGATGATCGCATTTGACGTTCCAAATGGGCTATACGTTGCTTCCATCGTAATCGGATTCTGCTTTGGTGCACAATGGCCGTTGATTTTCGCTATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCAACGCTTTACAATTTCGGGTCGGTCGCGAGTCCAATTGGGCTATATGTTCTGAATGTGAAAGTGGCTGGGAATTTCTATGACAGAGAAGCAGAGAAGCAGCTCGAAGCAAAAGGGATTATACGAAAAGCAGGGGAAGAATTAAAGTGCATTGGAGGGGCATGCTTTAAGCTTTCATTCATTGTAATCACCGGAGTTACTTTATTGGGTATGCTAGTTTCATTGATTTTAGTAATTAGAACACGGAGTTTCTACCGGAGTGATATTTATAAGAAGTTTAGAGAAGAAGTTGAAACAACAGAGGTGGCCGGAAATAGGGTTGTAGAGGCCGCCGGTGAAACAGAAGAGAGAAGAAAATGA 1746 43.01 MLAGERILGCFDIRSIVVHVITRRWFVLFASLLIMGVAGSTYIFSLYSNDIKSTLGYDQTTLNLLSFSKDLGANIGVLSGLINEVTPPWVVLSIGALMNFFGYFMIWLAITNRISTPKVWQMCLYICIGANSQSFANTGSMVTCVMNFPESRGVVLGILKGYAGLSGAIITQLFHAFYGADTKSLVLFIGWLPTAVSFASLRIIRIIKVIRQPNELKVFYNFLYISLALAGFLMLMIIVESKTEFTQNQYGGSAAVVLLLLLLPLLIVVMEEYKLWKLKTALIQSPNPSVQIVTEQLPKTEHPKQEHKEPSCWTTIFSPPKRGEDFTILQGLFSVDMLILFTSAACGMGGTLTAIDNLGQIGVSLGYPKRSISTFVTLVSIWNYLGRVACGFLSEIVLRKYKCPRTLILSLILLLSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLEAKGIIRKAGEELKCIGGACFKLSFIVITGVTLLGMLVSLILVIRTRSFYRSDIYKKFREEVETTEVAGNRVVEAAGETEERRK* 582
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 28456728 28458951 - CsaV3_5G035980.1 Csa05g02779 531166
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02779 581 PANTHER MFS TRANSPORTER 10 567 - -
Csa05g02779 581 Gene3D MFS general substrate transporter like domains 218 489 IPR036259 -
Csa05g02779 581 CDD MFS_Mch1p_like 24 533 - -
Csa05g02779 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 567 - -
Csa05g02779 581 Pfam Nodulin-like 24 269 IPR010658 -
Csa05g02779 581 SUPERFAMILY MFS general substrate transporter 22 545 IPR036259 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g02779 Csa-Chr5:28456728 Csa06g02620 Csa-Chr6:23040506 0 dispersed
Csa05g02778 Csa-Chr5:28453067 Csa05g02779 Csa-Chr5:28456728 0 tandem
Csa05g02779 Csa-Chr5:28456728 Csa05g02780 Csa-Chr5:28460136 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02779 - - csv:101204538 1124.38