Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02821 ATGGCTGAATGTGGAACAGAGCAGCGTACTTTGGAAGATACCTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCACCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTATTGGGATTCATATCCCTACTTCTAACGATAGGCCAAGATGCTGTCACTCAAATTTGTGTTTCGAAAGAGCTTGCAGCAACTTGGCTTCCCTGTGCAGCAAGAGCTAAAACAGGAGTAAAAGTTGCGAAGAACAGTCGTCTTAGACTTCTTGAATTTTTAGATCCTGACTATGGTTCGAGGCGTATTTTAGCCTCGAAAGGAGATGATGCATGCGCTAAGAGGGGCCAACTCGCTTTCGTGTCGGCATATGGAATCCATCAGCTCCATATTTTCATCTTCGTATTGGCTGTCTTCCATGTCCTGTACTGCATCATAACTTTGGCTTTTGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAAACCAAGACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCTAGAGATACTACGTTTGGACGCCGACACTTGAGCTTCTGGAGTCGTACACCAATTTCCCTCTGGATTGTTTGTTTCTTCAGACAGTTCTTTGGATCAGTTACCAAGGTTGATTACATGACACTGAGACATGGATTCATTGTTGCACATCTTGCACCCGGAAGTGAAGTAAAATTTGATTTCCACAAATACATTAGCAGATCTCTGGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCCGCAATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAATTATAATTCTATTGGTGGGAACAAAGCTCCATGTTATTATAACTCATATGGGATTGACAATTCAAGAAAGGGGTCATGTTGTGAAGGGTGTTCCCGTCGTTCAGCCTCGGGATGACCTGTTTTGGTTTGGACGTCCACAACTTATTCTCTTCCTGATCCACTTTGTTCTCTTTATGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATATGCATTTAAGTGGATGGGTTGTTTCCATCAGCGAGTTGAAGATATTGTCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTCTGCAGTTATGTCACACTCCCACTCTATGCTTTGGTTACTCAGATGGGCTCTAACATGAGACCAACCATTTTCAACGACCGAGTGGCGACGGCATTGAAGAACTGGCACCACTCAGCCAAGAAGAACATGAAGCAGCACCGCAACCCAGACAGTACCTCACCATTCTCAAGCAGGCCAGCTACTCCAACTCACGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCCGATGCCGAACCCGATCGTTGGGAAGAGTTGCCTCCTTCTTCACACCATAGTAGAGCCCCCCATCATGATAATCATCAAGATCAACAAGAACAATCTGAGACAATAATTAGAGAACAGGAGATGACAGTTCAAGGACCAAGTTCAAGTGAAACCGGTTCCATAACACGTCCTGCTCGCCCTCATCAGGAAATCACTAGGACTCCATCAGACTTCTCATTTGCCAAATGA 1725 44.06 MAECGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTIGQDAVTQICVSKELAATWLPCAARAKTGVKVAKNSRLRLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCIITLAFGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPISLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLIIILLVGTKLHVIITHMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMNAFQLAFFAWTTYAFKWMGCFHQRVEDIVIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMRPTIFNDRVATALKNWHHSAKKNMKQHRNPDSTSPFSSRPATPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWEELPPSSHHSRAPHHDNHQDQQEQSETIIREQEMTVQGPSSSETGSITRPARPHQEITRTPSDFSFAK* 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28700815 28705837 - CsaV3_5G036400.1 Csa05g02821 531208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02821 574 Pfam Mlo family 8 489 IPR004326 GO:0006952|GO:0016021
Csa05g02821 574 MobiDBLite consensus disorder prediction 462 477 - -
Csa05g02821 574 MobiDBLite consensus disorder prediction 493 533 - -
Csa05g02821 574 MobiDBLite consensus disorder prediction 534 574 - -
Csa05g02821 574 PANTHER MLO-LIKE PROTEIN 1 4 556 IPR004326 GO:0006952|GO:0016021
Csa05g02821 574 PANTHER MLO-LIKE PROTEIN 4 556 - -
Csa05g02821 574 MobiDBLite consensus disorder prediction 451 574 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01295 Csa-Chr1:8230778 Csa05g02821 Csa-Chr5:28700815 0 dispersed
Csa05g02821 Csa-Chr5:28700815 Csa06g03404 Csa-Chr6:28194532 2.50E-164 dispersed
Csa05g02821 Csa-Chr5:28700815 Csa06g01679 Csa-Chr6:14713131 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02821 K08472 - csv:101218929 1171.76