Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02886 ATGGGTGAAGTGTCAAAGAGCGTGTCGCCCCCCTCAAGCCCAGGCGGAGAAAGGGTGGATGAGAGGAACGTTCTGCAGAAACACGTAGCGTTCTTTGATAGGGATAAAGATGGGGTGGTTTATCCATGGGAGACATTCAAGGGGTTCCGAGCAATTGGCGCTAATTTGTTTTTGTCCACACTCAGTGCTGTTTTTATCAACATTGGACTTAGCTCCAAAACCCGTCCGGGGAAGTTTCCTAATTTTCTATTCCCAATTGAGATAAAAAACATTCAACTCGCAAAACATGGAAGTGATTCTGGTGTATATGATTCTGAAGGAAGATTTGTTAGTAAGAAATTTGAAGAAATATTCAAGAAGCATGCCCTAACCTACCCAGATGCCTTGACAGAAAAAGAACTTAAAGCATTGCTCAAGTCAAATAGGGAGCCTAAAGACTACAGTGGATGGGTTGCTGCATGGACAGAATGGACAACTCTATACAACCTTTGCAAAGATGATAATGGTTTACTTAAAAAGGAAACTGTGAAGGCTGTTTATGATGGGAGCTTATTTGAGCATATGGAGAAACAAAGAGCATCGAAAAAGAAGAAATGA 597 41.54 MGEVSKSVSPPSSPGGERVDERNVLQKHVAFFDRDKDGVVYPWETFKGFRAIGANLFLSTLSAVFINIGLSSKTRPGKFPNFLFPIEIKNIQLAKHGSDSGVYDSEGRFVSKKFEEIFKKHALTYPDALTEKELKALLKSNREPKDYSGWVAAWTEWTTLYNLCKDDNGLLKKETVKAVYDGSLFEHMEKQRASKKKK* 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29264020 29268631 + CsaV3_5G037050.1 Csa05g02886 531273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02886 198 Pfam Caleosin related protein 21 188 IPR007736 -
Csa05g02886 198 PANTHER PEROXYGENASE 3-RELATED 19 198 IPR007736 -
Csa05g02886 198 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 19 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01032 Csa-Chr2:10007705 Csa05g02886 Csa-Chr5:29264020 5.61E-60 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02886 K17991 - csv:101213829 389.808