Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02886 ATGGGTGAAGTGTCAAAGAGCGTGTCGCCCCCCTCAAGCCCAGGCGGAGAAAGGGTGGATGAGAGGAACGTTCTGCAGAAACACGTAGCGTTCTTTGATAGGGATAAAGATGGGGTGGTTTATCCATGGGAGACATTCAAGGGGTTCCGAGCAATTGGCGCTAATTTGTTTTTGTCCACACTCAGTGCTGTTTTTATCAACATTGGACTTAGCTCCAAAACCCGTCCGGGGAAGTTTCCTAATTTTCTATTCCCAATTGAGATAAAAAACATTCAACTCGCAAAACATGGAAGTGATTCTGGTGTATATGATTCTGAAGGAAGATTTGTTAGTAAGAAATTTGAAGAAATATTCAAGAAGCATGCCCTAACCTACCCAGATGCCTTGACAGAAAAAGAACTTAAAGCATTGCTCAAGTCAAATAGGGAGCCTAAAGACTACAGTGGATGGGTTGCTGCATGGACAGAATGGACAACTCTATACAACCTTTGCAAAGATGATAATGGTTTACTTAAAAAGGAAACTGTGAAGGCTGTTTATGATGGGAGCTTATTTGAGCATATGGAGAAACAAAGAGCATCGAAAAAGAAGAAATGA 597 41.54 MGEVSKSVSPPSSPGGERVDERNVLQKHVAFFDRDKDGVVYPWETFKGFRAIGANLFLSTLSAVFINIGLSSKTRPGKFPNFLFPIEIKNIQLAKHGSDSGVYDSEGRFVSKKFEEIFKKHALTYPDALTEKELKALLKSNREPKDYSGWVAAWTEWTTLYNLCKDDNGLLKKETVKAVYDGSLFEHMEKQRASKKKK* 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29264020 29268631 + CsaV3_5G037050.1 Csa05g02886 531273

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02886 198 Pfam Caleosin related protein 21 188 IPR007736 -
Csa05g02886 198 PANTHER PEROXYGENASE 3-RELATED 19 198 IPR007736 -
Csa05g02886 198 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 19 198 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02886 K17991 PXG; peroxygenase [EC:1.11.2.3] - csv:101213829 389.808
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01032 Csa-Chr2:10007705 Csa05g02886 Csa-Chr5:29264020 5.61E-60 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa05g02886 . 20 198 Pollen Coat Proteome AT1G23240 54.7 3.6e-57 218.4
Csa05g02886 . 20 198 Pollen Coat Proteome AT1G23240 54.7 3.6e-57 218.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007695 2 1 0 0 3 1 2 1 1 0 1 1 2 1 1 2 1 2 1 1 1 1 2 1 1 1 1 2 1 1 36