Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02917 ATGTCACAAGGGTTTGCGATCGAGCTTTATTTCGATCCAGCACTTGAAAATCAAGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAGCTCATCGAAATTGAGTCACGTCCTCACATTACCCTTTTCTCTACCCCGTTTCTCGAACCCACAAAAGTTGAATCGATCGTTAAAAATTTCGCTTCTAAACAGGAACCTTTGGCTTTGTCTTTATCGTCAATTGGTAGCCTTCCCAGCGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTTCTTCAATTTCAGTCCCAATTGTGTGAAGCAATGAGGAAAGAAGGAATTGAAATTGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA 552 44.75 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESIVKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA* 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29648354 29650999 + CsaV3_5G037360.1 Csa05g02917 531304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02917 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Csa05g02917 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
Csa05g02917 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Csa05g02917 183 PANTHER - 1 182 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02917 - - csv:101208638 360.147