Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02920 ATGGCTCCCAGCTCTGTTGTTGTCACAATTGAGAAGCATAATAGCTTCCCTTTAGTGGAAATCAATGGCTCTGAATCTTTGTTACTTCCTGAAAAGCAAAAGGCTGCTAGTCCTAAGCAACTCACATGGGTTCTTCTTCTTAAAGCTCATAGAGCTCTGTTTTTCTTCTCATGGTTAGCTATGACTGTGAAGGCTGTTTTTGCTTCTGTTAAGAAACGCATTGCACATGCGGGTCTTAATGAAAATGATTCTAAAAACCGTGGGAAGTTGTATAGATTCATCAAGGGGTTTCTTGTTTTTTCTATTGTGGGTTTGATTTTTGAAGTTGTTGCGCATTTCAAGAAGTGGAATCTAGGAATGATTCAGCCATTGGAGGCTGAAGTTCATGGGATTCTTCAGTGGTTTTATGTTTCTTGGCTTGCGTTTCGTATTGATTACATTGCTCCATTGGTATTAATGCTTTCGAAATTCTGCGTTGTTTTGTTCTTGATTCAATCTCTCGATCGTCTTGTTCTCTGTTTTGGGTGCTTTTGGATTAAGTACAAGAAAATCAAACCCATGATTCAAGATGATGCTTATGATTTGGAAGATGCTTCAACTTTTCCTATGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGAGAGGTCTATGCACAATCAATCGCTGCTGCTTGTGAGCTTGATTGGCCAAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTCCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATGAAAAGGGTGTTAACATTGTTTATAGACATAGATTGATTCGAACTGGATACAAAGCTGGGAATCTCAAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAATCCAGATTTCCTTAAACTATGTATCCCTCATTTCAAGGGAAATCCTGAGCTGGGTCTTGTTCAAGCTCGTTGGGCGTTTGTTAACAAGGAAGAAAACTTACTAACAAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTGGAGCAGCAAGTTAATGGAGTTTTCCTGAATTTCTTTGGATTCAATGGAACCGCAGGCGTTTGGAGAACGAAAGCACTTGAAGAATCCGGTGGCTGGCTCGAGCGAACAACCGTGGAAGATATGGATATTGCTGTTCGAGCTCACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTTAAAGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTATAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCTATCATTACTTCAAAGATATCAATATGGAAGAAGACCAACTTGATATTTCTGTTCTTTCTGTTGAGAAAACTCATACTTCCATTTTACTCATTCACTTTGTTTTGCATCATACTTCCATTAACAATGTTTATTCCAGAAGCAGAATTGCCTCTTTGGGTAATCTGCTACATCCCAGTTTTCATGTCCTTCCTAAACATTCTTCCATCCCCAAAATCCTTCCCCTTCTTGATCCCATATCTCTTGTTTGAAAACACGATGTCCGTCACAAAGTTCAATGCCATGGTTTCGGGGCTATTCCAGCTTGGAAGTTCATACGAATGGGTAGTGACGAAAAAGACAGGACGATCATCGGAATCCGACTTCTTAGCATTGGCAGAACGAGAGTCGAAAACATCAAACGATGAGAAGATTTTAAGGAGACATTCAGAGTCGGGGCTTGAGTTGTTGAGTAAAATGAACCAAGAAGAGATAAAGCAAAAAGTGGCTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAACTTGCTCTTGCTTTTCTATTGCTCACTGCATCAGCTAGAAGCTTGCTGTCAGAACATGGAGTTCATTTCTATTTCTTGCTTTTTCAAGGTTTGTCATTCCTGGTGGTGGGTTTGGACTTGATTGGTGAACAAATGAACTGA 2007 39.76 MAPSSVVVTIEKHNSFPLVEINGSESLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWLAMTVKAVFASVKKRIAHAGLNENDSKNRGKLYRFIKGFLVFSIVGLIFEVVAHFKKWNLGMIQPLEAEVHGILQWFYVSWLAFRIDYIAPLVLMLSKFCVVLFLIQSLDRLVLCFGCFWIKYKKIKPMIQDDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLCIPHFKGNPELGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRTKALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSFLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKTGRSSESDFLALAERESKTSNDEKILRRHSESGLELLSKMNQEEIKQKVASKKKRNKVYRKELALAFLLLTASARSLLSEHGVHFYFLLFQGLSFLVVGLDLIGEQMN* 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29658170 29661151 - CsaV3_5G037390.1 Csa05g02920 531307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02920 668 Coils Coil 602 622 - -
Csa05g02920 668 PANTHER - 1 667 - -
Csa05g02920 668 SUPERFAMILY Nucleotide-diphospho-sugar transferases 204 504 IPR029044 -
Csa05g02920 668 Pfam Glycosyl transferase family group 2 296 502 IPR001173 -
Csa05g02920 668 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 194 421 IPR029044 -
Csa05g02920 668 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 1 667 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04414 Csa-Chr3:38476463 Csa05g02920 Csa-Chr5:29658170 0 dispersed
Csa05g02920 Csa-Chr5:29658170 Csa07g01566 Csa-Chr7:16099790 0 dispersed
Csa05g02920 Csa-Chr5:29658170 Csa04g02506 Csa-Chr4:24889393 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02920 K20887 - csv:101208151 1309.66