Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g02923 ATGGCTGAAAATGAACAGGAGACTCGATCTTTGGCTTTGACTCCCACTTGGTCTGTTGCTTCTGTGCTGACTATTTTCGTTGCAGTCTCTTTGCTTGTGGAGCGGTCCATTCACCGGTTAAGCACTTGGTTGGGGAAAACTAATCGAAAGCCACTGTTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTTTTAACAGCTACTTCAAGCTCAATATCAAATATCTGCGTTCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAGAGCTGAGGCTGACGAACATGAAGATGACAATTCATCCGAGGAACGGAAACTATATACAGCTTCTGTATTACCCCATTTGTTTAGGCGGATGCTTAATGTGAATAAGAAAACCTGCAAAGAGGGTTATGAGCCGTTTGTTTCATATGAGGGTCTTGAGCAATTGCATCGCTTTATCTTTATAATGGCAGTAACTCATATATCTTATAGCTGCTTAACAATGTTACTCGCAATTGTGAAGATTCACAGATGGAGGGTTTGGGAGAATGAAGCCCATATGGACAGACATGATTCACTAAATGATATCACAAGAGAAATGACGTTGCGGAGGCAATCAACCTTTGTTCGATATCACACTTCAAATCCTATGACAAGGAACAGTTTTCTAATCTGGGTGACATGTTTTTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCTGACTACCTCACACTTCGCAAGGGCTTCATCATGAATCATCATCTCCCCTTGACTTATGATTTCCACAGTTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTTGGCGTGAGTGGTCCGTTGTGGGGATTTGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCGTTCCTATTGCTCTTGTTCTTTTAGTGGGCACGAAGCTGCAACATGTAATTGCAACATTGGCATTGGAAAGTGCTGGTATAACTGGTTCATTTTCGGGTTCAAAGCTAAAGCCAAGAGATGATCTTTTCTGGTTTAAGAAGCCTGAACTCCTTTTGTCCTTAATCCACTTTATCCTTTTCCAGAATGCATTTGAGTTGGCATCATTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTTATCAGGAATCATATGCTTGTCTATGCAAGACTTGTTTTGGGATTCGCTGGGCAGTTCCTTTGCAGCTACAGCACCTTGCCCTTGTATGCTTTGGTTACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATCCATGGATGGGGGAAGGCAGCTAGAAGGAAAAGAAGGCTCCGCATGTTTGCAGATGACACCACGATTCACACTGAAACAAGCACGGTGATGTCACTTGAGGATGATGACCGTAGGCTTATTGATGATATTTCTGAAACTACTGCCGACTACACGTCAATCGAACTACAGCCGACTTCTGTACACGATGAACCTGACTCTGTTCCTAATGAACGACCAAGCAGAGCTAGAACGCCTCTTCTACAACCCTCTACATCTCTTTCTACATCAGTTGATCATAAGTTTGAGGTTGATTAA 1626 42.0 MAENEQETRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSISNICVPSKFYNTPFTPCTRAEADEHEDDNSSEERKLYTASVLPHLFRRMLNVNKKTCKEGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRVWENEAHMDRHDSLNDITREMTLRRQSTFVRYHTSNPMTRNSFLIWVTCFFRQFGNSVVRADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASVPIALVLLVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLVLGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFADDTTIHTETSTVMSLEDDDRRLIDDISETTADYTSIELQPTSVHDEPDSVPNERPSRARTPLLQPSTSLSTSVDHKFEVD* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29673306 29680340 - CsaV3_5G037420.1 Csa05g02923 531310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g02923 541 PANTHER MLO-LIKE PROTEIN 1 4 500 IPR004326 GO:0006952|GO:0016021
Csa05g02923 541 PANTHER MLO-LIKE PROTEIN 11 4 500 - -
Csa05g02923 541 MobiDBLite consensus disorder prediction 499 541 - -
Csa05g02923 541 Pfam Mlo family 9 466 IPR004326 GO:0006952|GO:0016021
Csa05g02923 541 MobiDBLite consensus disorder prediction 520 535 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02353 Csa-Chr4:23944644 Csa05g02923 Csa-Chr5:29673306 0 dispersed
Csa05g02923 Csa-Chr5:29673306 Csa06g00633 Csa-Chr6:5305552 1.05E-121 dispersed
Csa05g02923 Csa-Chr5:29673306 Csa06g01679 Csa-Chr6:14713131 7.29E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g02923 K08472 - csv:101217434 1071.23